Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC087477.1-201ENST00000465747 340 ntBASIC0.5□□□□□ -2.33
SSSCA1O60232 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.5□□□□□ -2.33
SSSCA1O60232 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.5□□□□□ -2.33
SSSCA1O60232 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.5□□□□□ -2.33
SSSCA1O60232 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.5□□□□□ -2.33
SSSCA1O60232 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.5□□□□□ -2.33
SSSCA1O60232 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC0.5□□□□□ -2.33
SSSCA1O60232 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.5□□□□□ -2.33
SSSCA1O60232 LARP7P2-201ENST00000575306 125 ntBASIC0.5□□□□□ -2.33
SSSCA1O60232 AC008088.1-201ENST00000580993 280 ntBASIC0.5□□□□□ -2.33
SSSCA1O60232 CLIC4P2-201ENST00000601934 717 ntBASIC0.5□□□□□ -2.33
SSSCA1O60232 AC087045.1-201ENST00000605856 382 ntBASIC0.5□□□□□ -2.33
SSSCA1O60232 AC025754.2-201ENST00000606491 432 ntBASIC0.5□□□□□ -2.33
SSSCA1O60232 BX284668.6-201ENST00000606899 438 ntBASIC0.5□□□□□ -2.33
SSSCA1O60232 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.5□□□□□ -2.33
SSSCA1O60232 MIR8065-201ENST00000620577 100 ntBASIC0.5□□□□□ -2.33
SSSCA1O60232 AC027335.2-201ENST00000624030 375 ntBASIC0.5□□□□□ -2.33
SSSCA1O60232 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
SSSCA1O60232 AC099063.3-201ENST00000642066 185 ntBASIC0.5□□□□□ -2.33
SSSCA1O60232 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.5□□□□□ -2.33
SSSCA1O60232 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
SSSCA1O60232 DDX43P2-201ENST00000604753 1354 ntBASIC0.49□□□□□ -2.33
SSSCA1O60232 Y_RNA.140-201ENST00000363474 103 ntBASIC0.49□□□□□ -2.33
SSSCA1O60232 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.49□□□□□ -2.33
SSSCA1O60232 SNORA18.2-201ENST00000383865 132 ntBASIC0.49□□□□□ -2.33
SSSCA1O60232 RNU1-39P-201ENST00000383897 165 ntBASIC0.49□□□□□ -2.33
SSSCA1O60232 RNU6-611P-201ENST00000384276 104 ntBASIC0.49□□□□□ -2.33
SSSCA1O60232 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.49□□□□□ -2.33
SSSCA1O60232 AL591043.1-201ENST00000432461 424 ntBASIC0.49□□□□□ -2.33
SSSCA1O60232 MTND2P21-201ENST00000436242 1042 ntBASIC0.49□□□□□ -2.33
SSSCA1O60232 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC0.49□□□□□ -2.33
SSSCA1O60232 AC244505.5-201ENST00000443639 207 ntBASIC0.49□□□□□ -2.33
SSSCA1O60232 RPL23AP35-201ENST00000451906 501 ntBASIC0.49□□□□□ -2.33
SSSCA1O60232 RNU6-581P-201ENST00000516214 105 ntBASIC0.49□□□□□ -2.33
SSSCA1O60232 RNU6-586P-201ENST00000517265 104 ntBASIC0.49□□□□□ -2.33
SSSCA1O60232 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.49□□□□□ -2.33
SSSCA1O60232 AP003484.1-201ENST00000530974 250 ntBASIC0.49□□□□□ -2.33
SSSCA1O60232 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC0.49□□□□□ -2.33
SSSCA1O60232 BPTFP1-201ENST00000579209 492 ntBASIC0.49□□□□□ -2.33
SSSCA1O60232 AC098848.2-201ENST00000588023 330 ntBASIC0.49□□□□□ -2.33
SSSCA1O60232 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.49□□□□□ -2.33
SSSCA1O60232 WISP1-OT1-201ENST00000602893 642 ntBASIC0.49□□□□□ -2.33
SSSCA1O60232 AC021171.1-201ENST00000603137 706 ntBASIC0.49□□□□□ -2.33
SSSCA1O60232 AL590095.2-201ENST00000604136 117 ntBASIC0.49□□□□□ -2.33
SSSCA1O60232 AC112220.3-201ENST00000605502 502 ntBASIC0.49□□□□□ -2.33
SSSCA1O60232 LINC00216-201ENST00000623548 1126 ntBASIC0.49□□□□□ -2.33
SSSCA1O60232 AC079416.3-201ENST00000624479 549 ntBASIC0.49□□□□□ -2.33
SSSCA1O60232 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.49□□□□□ -2.33
SSSCA1O60232 AL590396.4-201ENST00000636779 956 ntBASIC0.49□□□□□ -2.33
SSSCA1O60232 SNORA25-201ENST00000384384 134 ntBASIC0.48□□□□□ -2.33
SSSCA1O60232 AL133475.1-201ENST00000404414 305 ntBASIC0.48□□□□□ -2.33
SSSCA1O60232 CCNG1P1-201ENST00000406783 885 ntBASIC0.48□□□□□ -2.33
SSSCA1O60232 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
SSSCA1O60232 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.48□□□□□ -2.33
SSSCA1O60232 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.48□□□□□ -2.33
SSSCA1O60232 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.48□□□□□ -2.33
SSSCA1O60232 AC092001.1-201ENST00000453012 261 ntBASIC0.48□□□□□ -2.33
SSSCA1O60232 CECR9-201ENST00000453421 199 ntBASIC0.48□□□□□ -2.33
SSSCA1O60232 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.48□□□□□ -2.33
SSSCA1O60232 RPL32P14-201ENST00000463196 378 ntBASIC0.48□□□□□ -2.33
SSSCA1O60232 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.48□□□□□ -2.33
SSSCA1O60232 AC108078.1-201ENST00000508073 725 ntBASIC0.48□□□□□ -2.33
SSSCA1O60232 RNU6-113P-201ENST00000516653 101 ntBASIC0.48□□□□□ -2.33
SSSCA1O60232 AC136628.3-201ENST00000521868 290 ntBASIC0.48□□□□□ -2.33
SSSCA1O60232 AP000907.2-201ENST00000530827 353 ntBASIC0.48□□□□□ -2.33
SSSCA1O60232 AC004853.1-201ENST00000604902 698 ntBASIC0.48□□□□□ -2.33
SSSCA1O60232 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.48□□□□□ -2.33
SSSCA1O60232 MTCO1P9-201ENST00000505577 1534 ntBASIC0.48□□□□□ -2.33
SSSCA1O60232 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.48□□□□□ -2.33
SSSCA1O60232 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.47□□□□□ -2.33
SSSCA1O60232 SNORD33-201ENST00000362761 85 ntBASIC0.47□□□□□ -2.33
SSSCA1O60232 RPL23AP32-201ENST00000395315 459 ntBASIC0.47□□□□□ -2.33
SSSCA1O60232 MRPL35P1-201ENST00000404272 572 ntBASIC0.47□□□□□ -2.33
SSSCA1O60232 RNU2-32P-201ENST00000411193 191 ntBASIC0.47□□□□□ -2.33
SSSCA1O60232 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.47□□□□□ -2.33
SSSCA1O60232 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.47□□□□□ -2.33
SSSCA1O60232 RPS15AP9-201ENST00000439856 381 ntBASIC0.47□□□□□ -2.33
SSSCA1O60232 snoU13.23-201ENST00000458863 104 ntBASIC0.47□□□□□ -2.33
SSSCA1O60232 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.47□□□□□ -2.33
SSSCA1O60232 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC0.47□□□□□ -2.33
SSSCA1O60232 HMGN1P13-201ENST00000505795 138 ntBASIC0.47□□□□□ -2.33
SSSCA1O60232 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC0.47□□□□□ -2.33
SSSCA1O60232 RNU6-678P-201ENST00000516832 109 ntBASIC0.47□□□□□ -2.33
SSSCA1O60232 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.47□□□□□ -2.33
SSSCA1O60232 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.47□□□□□ -2.33
SSSCA1O60232 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.47□□□□□ -2.33
SSSCA1O60232 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
SSSCA1O60232 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.47□□□□□ -2.33
SSSCA1O60232 AL022345.2-201ENST00000606307 135 ntBASIC0.47□□□□□ -2.33
SSSCA1O60232 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.47□□□□□ -2.33
SSSCA1O60232 uc_338.17-201ENST00000619633 179 ntBASIC0.47□□□□□ -2.33
SSSCA1O60232 AC009033.1-201ENST00000624279 431 ntBASIC0.47□□□□□ -2.33
SSSCA1O60232 MIR4275-201ENST00000636486 87 ntBASIC0.47□□□□□ -2.33
SSSCA1O60232 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
SSSCA1O60232 AC018630.2-201ENST00000534866 2403 ntBASIC0.46□□□□□ -2.34
SSSCA1O60232 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.46□□□□□ -2.34
SSSCA1O60232 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
SSSCA1O60232 RNU6-658P-201ENST00000384606 106 ntBASIC0.46□□□□□ -2.34
SSSCA1O60232 MIR508-201ENST00000384857 115 ntBASIC0.46□□□□□ -2.34
SSSCA1O60232 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms