Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 RN7SKP298-201ENST00000515950 94 ntBASIC3.19□□□□□ -1.9
CREB3O43889 RNU1-104P-201ENST00000517280 175 ntBASIC3.19□□□□□ -1.9
CREB3O43889 AP002404.1-201ENST00000532005 451 ntBASIC3.19□□□□□ -1.9
CREB3O43889 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.19□□□□□ -1.9
CREB3O43889 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.19□□□□□ -1.9
CREB3O43889 AC136619.2-201ENST00000563361 631 ntBASIC3.19□□□□□ -1.9
CREB3O43889 AC105137.2-201ENST00000569073 466 ntBASIC3.19□□□□□ -1.9
CREB3O43889 MIR5004-201ENST00000579078 107 ntBASIC3.19□□□□□ -1.9
CREB3O43889 AC107871.2-201ENST00000612894 502 ntBASIC3.19□□□□□ -1.9
CREB3O43889 U4atac.1-201ENST00000618345 95 ntBASIC3.19□□□□□ -1.9
CREB3O43889 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CREB3O43889 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CREB3O43889 RNU6-1010P-201ENST00000362757 107 ntBASIC3.18□□□□□ -1.9
CREB3O43889 RNU6-45P-201ENST00000384471 107 ntBASIC3.18□□□□□ -1.9
CREB3O43889 SNORD116-20-201ENST00000384529 92 ntBASIC3.18□□□□□ -1.9
CREB3O43889 Y_RNA.553-201ENST00000384670 102 ntBASIC3.18□□□□□ -1.9
CREB3O43889 MIR128-1-201ENST00000384921 82 ntBASIC3.18□□□□□ -1.9
CREB3O43889 AC007064.1-201ENST00000412238 351 ntBASIC3.18□□□□□ -1.9
CREB3O43889 UBE2V1P10-201ENST00000414685 269 ntBASIC3.18□□□□□ -1.9
CREB3O43889 PGBD4P6-201ENST00000421501 610 ntBASIC3.18□□□□□ -1.9
CREB3O43889 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CREB3O43889 MTND4P32-201ENST00000437189 1237 ntBASIC3.18□□□□□ -1.9
CREB3O43889 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.18□□□□□ -1.9
CREB3O43889 AC132479.1-201ENST00000449160 144 ntBASIC3.18□□□□□ -1.9
CREB3O43889 SNORA59A-201ENST00000459326 152 ntBASIC3.18□□□□□ -1.9
CREB3O43889 AC010424.1-201ENST00000506336 297 ntBASIC3.18□□□□□ -1.9
CREB3O43889 AC079140.5-201ENST00000507882 310 ntBASIC3.18□□□□□ -1.9
CREB3O43889 AF213884.2-201ENST00000510417 903 ntBASIC3.18□□□□□ -1.9
CREB3O43889 AC109329.1-201ENST00000518744 317 ntBASIC3.18□□□□□ -1.9
CREB3O43889 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.18□□□□□ -1.9
CREB3O43889 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
CREB3O43889 AC073410.2-201ENST00000603240 332 ntBASIC3.18□□□□□ -1.9
CREB3O43889 AL138963.2-201ENST00000605137 226 ntBASIC3.18□□□□□ -1.9
CREB3O43889 YPEL5P2-201ENST00000605553 359 ntBASIC3.18□□□□□ -1.9
CREB3O43889 AC093788.1-201ENST00000609356 927 ntBASIC3.18□□□□□ -1.9
CREB3O43889 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.18□□□□□ -1.9
CREB3O43889 MIR8057-201ENST00000620957 69 ntBASIC3.18□□□□□ -1.9
CREB3O43889 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CREB3O43889 CR381653.2-201ENST00000624041 768 ntBASIC3.18□□□□□ -1.9
CREB3O43889 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
CREB3O43889 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CREB3O43889 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.17□□□□□ -1.9
CREB3O43889 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CREB3O43889 RNA5SP374-201ENST00000362939 125 ntBASIC3.17□□□□□ -1.9
CREB3O43889 RNU6-607P-201ENST00000411283 108 ntBASIC3.17□□□□□ -1.9
CREB3O43889 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.17□□□□□ -1.9
CREB3O43889 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.17□□□□□ -1.9
CREB3O43889 AC245054.2-201ENST00000415639 319 ntBASIC3.17□□□□□ -1.9
CREB3O43889 NUP35P1-201ENST00000422734 947 ntBASIC3.17□□□□□ -1.9
CREB3O43889 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.17□□□□□ -1.9
CREB3O43889 AL358934.1-201ENST00000432346 324 ntBASIC3.17□□□□□ -1.9
CREB3O43889 AC000111.3-201ENST00000433478 193 ntBASIC3.17□□□□□ -1.9
CREB3O43889 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.17□□□□□ -1.9
CREB3O43889 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.17□□□□□ -1.9
CREB3O43889 AP000936.2-201ENST00000447151 681 ntBASIC3.17□□□□□ -1.9
CREB3O43889 UQCRHP3-201ENST00000451503 251 ntBASIC3.17□□□□□ -1.9
CREB3O43889 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.17□□□□□ -1.9
CREB3O43889 AL139109.1-201ENST00000455491 297 ntBASIC3.17□□□□□ -1.9
CREB3O43889 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.17□□□□□ -1.9
CREB3O43889 DYNLL1P5-201ENST00000467158 270 ntBASIC3.17□□□□□ -1.9
CREB3O43889 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.17□□□□□ -1.9
CREB3O43889 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.17□□□□□ -1.9
CREB3O43889 AC117532.1-201ENST00000514638 323 ntBASIC3.17□□□□□ -1.9
CREB3O43889 LRRC34P2-201ENST00000514850 553 ntBASIC3.17□□□□□ -1.9
CREB3O43889 RNU1-86P-201ENST00000516108 154 ntBASIC3.17□□□□□ -1.9
CREB3O43889 RNU1-107P-201ENST00000516617 154 ntBASIC3.17□□□□□ -1.9
CREB3O43889 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.17□□□□□ -1.9
CREB3O43889 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.17□□□□□ -1.9
CREB3O43889 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.17□□□□□ -1.9
CREB3O43889 MIR4703-201ENST00000577728 79 ntBASIC3.17□□□□□ -1.9
CREB3O43889 MTCO3P13-201ENST00000577757 781 ntBASIC3.17□□□□□ -1.9
CREB3O43889 LRRC37A5P-203ENST00000580181 585 ntBASIC3.17□□□□□ -1.9
CREB3O43889 MIR5194-201ENST00000582634 120 ntBASIC3.17□□□□□ -1.9
CREB3O43889 AC012119.1-201ENST00000603184 222 ntBASIC3.17□□□□□ -1.9
CREB3O43889 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.17□□□□□ -1.9
CREB3O43889 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CREB3O43889 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.17□□□□□ -1.9
CREB3O43889 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.16□□□□□ -1.9
CREB3O43889 RNU6-1120P-201ENST00000362988 108 ntBASIC3.16□□□□□ -1.9
CREB3O43889 SNORD116-9-201ENST00000384000 95 ntBASIC3.16□□□□□ -1.9
CREB3O43889 SNORD116-3-201ENST00000384287 95 ntBASIC3.16□□□□□ -1.9
CREB3O43889 SNORD116-7-201ENST00000384404 95 ntBASIC3.16□□□□□ -1.9
CREB3O43889 SNORD116-5-201ENST00000384462 95 ntBASIC3.16□□□□□ -1.9
CREB3O43889 RNU1-57P-201ENST00000384491 166 ntBASIC3.16□□□□□ -1.9
CREB3O43889 OR9R1P-201ENST00000412200 877 ntBASIC3.16□□□□□ -1.9
CREB3O43889 MTCO2P34-201ENST00000421994 607 ntBASIC3.16□□□□□ -1.9
CREB3O43889 EIF4EP4-201ENST00000424916 578 ntBASIC3.16□□□□□ -1.9
CREB3O43889 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.16□□□□□ -1.9
CREB3O43889 MTCO2P11-201ENST00000431069 680 ntBASIC3.16□□□□□ -1.9
CREB3O43889 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.16□□□□□ -1.9
CREB3O43889 AL031667.1-201ENST00000440222 725 ntBASIC3.16□□□□□ -1.9
CREB3O43889 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.16□□□□□ -1.9
CREB3O43889 AC073901.1-201ENST00000462471 408 ntBASIC3.16□□□□□ -1.9
CREB3O43889 RN7SL20P-201ENST00000488827 297 ntBASIC3.16□□□□□ -1.9
CREB3O43889 AC140059.1-201ENST00000489238 361 ntBASIC3.16□□□□□ -1.9
CREB3O43889 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.16□□□□□ -1.9
CREB3O43889 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.16□□□□□ -1.9
CREB3O43889 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.16□□□□□ -1.9
CREB3O43889 RNU6-1178P-201ENST00000516674 107 ntBASIC3.16□□□□□ -1.9
CREB3O43889 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms