Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SRGAP3O43295 AL356968.1-201ENST00000416622 474 ntBASIC4.3□□□□□ -1.72
SRGAP3O43295 AC002075.2-201ENST00000425207 252 ntBASIC4.3□□□□□ -1.72
SRGAP3O43295 HMGB1P9-201ENST00000429856 646 ntBASIC4.3□□□□□ -1.72
SRGAP3O43295 AL158071.1-201ENST00000430315 461 ntBASIC4.3□□□□□ -1.72
SRGAP3O43295 HMGB1P27-201ENST00000431429 603 ntBASIC4.3□□□□□ -1.72
SRGAP3O43295 AL353997.1-201ENST00000432936 108 ntBASIC4.3□□□□□ -1.72
SRGAP3O43295 RPL21P2-201ENST00000440049 481 ntBASIC4.3□□□□□ -1.72
SRGAP3O43295 DYNLT3P2-201ENST00000442517 295 ntBASIC4.3□□□□□ -1.72
SRGAP3O43295 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.3□□□□□ -1.72
SRGAP3O43295 AL121871.1-201ENST00000443413 436 ntBASIC4.3□□□□□ -1.72
SRGAP3O43295 OSTCP8-201ENST00000445117 448 ntBASIC4.3□□□□□ -1.72
SRGAP3O43295 RPS29P31-201ENST00000446147 164 ntBASIC4.3□□□□□ -1.72
SRGAP3O43295 RNY3P15-201ENST00000516297 97 ntBASIC4.3□□□□□ -1.72
SRGAP3O43295 IGKV2D-23-201ENST00000518179 286 ntBASIC4.3□□□□□ -1.72
SRGAP3O43295 AC022616.4-201ENST00000522985 181 ntBASIC4.3□□□□□ -1.72
SRGAP3O43295 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SRGAP3O43295 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.3□□□□□ -1.72
SRGAP3O43295 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
SRGAP3O43295 MIR5692A1-201ENST00000580523 69 ntBASIC4.3□□□□□ -1.72
SRGAP3O43295 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.3□□□□□ -1.72
SRGAP3O43295 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SRGAP3O43295 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SRGAP3O43295 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SRGAP3O43295 MFSD8-233ENST00000641482 4860 ntBASIC4.29□□□□□ -1.72
SRGAP3O43295 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SRGAP3O43295 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.29□□□□□ -1.72
SRGAP3O43295 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SRGAP3O43295 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SRGAP3O43295 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SRGAP3O43295 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
SRGAP3O43295 RNU6-874P-201ENST00000362390 105 ntBASIC4.29□□□□□ -1.72
SRGAP3O43295 Y_RNA.106-201ENST00000363189 100 ntBASIC4.29□□□□□ -1.72
SRGAP3O43295 RNA5SP50-201ENST00000363731 107 ntBASIC4.29□□□□□ -1.72
SRGAP3O43295 RNU6-1329P-201ENST00000365664 107 ntBASIC4.29□□□□□ -1.72
SRGAP3O43295 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.29□□□□□ -1.72
SRGAP3O43295 AL138785.1-201ENST00000425821 331 ntBASIC4.29□□□□□ -1.72
SRGAP3O43295 AC011816.1-201ENST00000441346 546 ntBASIC4.29□□□□□ -1.72
SRGAP3O43295 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SRGAP3O43295 CYCSP35-201ENST00000451978 304 ntBASIC4.29□□□□□ -1.72
SRGAP3O43295 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.29□□□□□ -1.72
SRGAP3O43295 PCMTD1P1-201ENST00000455560 355 ntBASIC4.29□□□□□ -1.72
SRGAP3O43295 AC008155.2-201ENST00000464337 397 ntBASIC4.29□□□□□ -1.72
SRGAP3O43295 AC008571.1-201ENST00000467232 300 ntBASIC4.29□□□□□ -1.72
SRGAP3O43295 RPS23P3-201ENST00000470993 430 ntBASIC4.29□□□□□ -1.72
SRGAP3O43295 RNU6-1143P-201ENST00000516125 104 ntBASIC4.29□□□□□ -1.72
SRGAP3O43295 RN7SKP258-201ENST00000517151 304 ntBASIC4.29□□□□□ -1.72
SRGAP3O43295 IGKV2-26-201ENST00000518305 343 ntBASIC4.29□□□□□ -1.72
SRGAP3O43295 AC067852.4-201ENST00000590314 478 ntBASIC4.29□□□□□ -1.72
SRGAP3O43295 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.29□□□□□ -1.72
SRGAP3O43295 AL109918.3-201ENST00000603072 338 ntBASIC4.29□□□□□ -1.72
SRGAP3O43295 AC019176.2-201ENST00000611579 315 ntBASIC4.29□□□□□ -1.72
SRGAP3O43295 AL021879.1-201ENST00000611756 288 ntBASIC4.29□□□□□ -1.72
SRGAP3O43295 AC078938.1-201ENST00000620993 318 ntBASIC4.29□□□□□ -1.72
SRGAP3O43295 AC138627.2-201ENST00000624202 601 ntBASIC4.29□□□□□ -1.72
SRGAP3O43295 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SRGAP3O43295 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SRGAP3O43295 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.29□□□□□ -1.72
SRGAP3O43295 ZNF72P-201ENST00000425869 1908 ntBASIC4.29□□□□□ -1.72
SRGAP3O43295 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.28□□□□□ -1.72
SRGAP3O43295 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SRGAP3O43295 AL451142.2-201ENST00000429076 2090 ntBASIC4.28□□□□□ -1.72
SRGAP3O43295 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
SRGAP3O43295 AC032011.1-201ENST00000611703 1549 ntBASIC4.28□□□□□ -1.72
SRGAP3O43295 RNU6-790P-201ENST00000384479 105 ntBASIC4.28□□□□□ -1.72
SRGAP3O43295 MIR7-3-201ENST00000384898 110 ntBASIC4.28□□□□□ -1.72
SRGAP3O43295 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.28□□□□□ -1.72
SRGAP3O43295 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.28□□□□□ -1.72
SRGAP3O43295 BX276092.3-201ENST00000424182 230 ntBASIC4.28□□□□□ -1.72
SRGAP3O43295 RPS15AP10-201ENST00000432472 382 ntBASIC4.28□□□□□ -1.72
SRGAP3O43295 AL357552.1-201ENST00000445254 415 ntBASIC4.28□□□□□ -1.72
SRGAP3O43295 PRDX3P3-201ENST00000447765 522 ntBASIC4.28□□□□□ -1.72
SRGAP3O43295 AL031274.1-201ENST00000450334 232 ntBASIC4.28□□□□□ -1.72
SRGAP3O43295 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.28□□□□□ -1.72
SRGAP3O43295 RPL31P60-201ENST00000478450 367 ntBASIC4.28□□□□□ -1.72
SRGAP3O43295 AC108860.1-201ENST00000484521 383 ntBASIC4.28□□□□□ -1.72
SRGAP3O43295 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.28□□□□□ -1.72
SRGAP3O43295 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.28□□□□□ -1.72
SRGAP3O43295 SUB1P3-201ENST00000564581 315 ntBASIC4.28□□□□□ -1.72
SRGAP3O43295 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.28□□□□□ -1.72
SRGAP3O43295 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.28□□□□□ -1.72
SRGAP3O43295 AC078899.3-201ENST00000599065 212 ntBASIC4.28□□□□□ -1.72
SRGAP3O43295 AC004825.2-201ENST00000616634 455 ntBASIC4.28□□□□□ -1.72
SRGAP3O43295 AC012314.7-201ENST00000619693 93 ntBASIC4.28□□□□□ -1.72
SRGAP3O43295 BMS1P21-201ENST00000634565 365 ntBASIC4.28□□□□□ -1.72
SRGAP3O43295 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SRGAP3O43295 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SRGAP3O43295 AC107027.3-201ENST00000565095 3473 ntBASIC4.28□□□□□ -1.72
SRGAP3O43295 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SRGAP3O43295 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SRGAP3O43295 TNPO1P3-201ENST00000436471 2662 ntBASIC4.28□□□□□ -1.73
SRGAP3O43295 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.27□□□□□ -1.73
SRGAP3O43295 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
SRGAP3O43295 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
SRGAP3O43295 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SRGAP3O43295 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.27□□□□□ -1.73
SRGAP3O43295 Y_RNA.288-201ENST00000364854 92 ntBASIC4.27□□□□□ -1.73
SRGAP3O43295 SNORD14.1-201ENST00000365609 90 ntBASIC4.27□□□□□ -1.73
SRGAP3O43295 Y_RNA.447-201ENST00000384184 113 ntBASIC4.27□□□□□ -1.73
SRGAP3O43295 SNORA70E-201ENST00000384492 135 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms