Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AL137161.1-201ENST00000532231 390 ntBASIC3.92□□□□□ -1.78
FOXN1O15353 AC011602.1-201ENST00000546484 331 ntBASIC3.92□□□□□ -1.78
FOXN1O15353 TGIF1P1-201ENST00000558095 802 ntBASIC3.92□□□□□ -1.78
FOXN1O15353 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
FOXN1O15353 MIR4504-201ENST00000577413 92 ntBASIC3.92□□□□□ -1.78
FOXN1O15353 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXN1O15353 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.92□□□□□ -1.78
FOXN1O15353 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.92□□□□□ -1.78
FOXN1O15353 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.92□□□□□ -1.78
FOXN1O15353 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.92□□□□□ -1.78
FOXN1O15353 AC092608.2-201ENST00000624427 218 ntBASIC3.92□□□□□ -1.78
FOXN1O15353 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.92□□□□□ -1.78
FOXN1O15353 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXN1O15353 KPNA2P1-201ENST00000458289 1591 ntBASIC3.92□□□□□ -1.78
FOXN1O15353 AL138713.1-201ENST00000624026 2130 ntBASIC3.92□□□□□ -1.78
FOXN1O15353 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
FOXN1O15353 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
FOXN1O15353 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXN1O15353 AP001486.2-201ENST00000561652 5113 ntBASIC3.91□□□□□ -1.78
FOXN1O15353 RNU6-82P-201ENST00000363970 107 ntBASIC3.91□□□□□ -1.78
FOXN1O15353 Y_RNA.252-201ENST00000364556 101 ntBASIC3.91□□□□□ -1.78
FOXN1O15353 SNORD115-7-201ENST00000365306 82 ntBASIC3.91□□□□□ -1.78
FOXN1O15353 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
FOXN1O15353 RPL31P2-201ENST00000413849 377 ntBASIC3.91□□□□□ -1.78
FOXN1O15353 AC080125.1-201ENST00000414888 684 ntBASIC3.91□□□□□ -1.78
FOXN1O15353 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.91□□□□□ -1.78
FOXN1O15353 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.91□□□□□ -1.78
FOXN1O15353 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.91□□□□□ -1.78
FOXN1O15353 RPS4XP2-201ENST00000458402 793 ntBASIC3.91□□□□□ -1.78
FOXN1O15353 RN7SL863P-201ENST00000462370 296 ntBASIC3.91□□□□□ -1.78
FOXN1O15353 RPL21P93-201ENST00000480465 489 ntBASIC3.91□□□□□ -1.78
FOXN1O15353 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.91□□□□□ -1.78
FOXN1O15353 AC079140.5-201ENST00000507882 310 ntBASIC3.91□□□□□ -1.78
FOXN1O15353 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.91□□□□□ -1.78
FOXN1O15353 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.91□□□□□ -1.78
FOXN1O15353 AC104057.1-201ENST00000515547 497 ntBASIC3.91□□□□□ -1.78
FOXN1O15353 RNU2-10P-201ENST00000516375 211 ntBASIC3.91□□□□□ -1.78
FOXN1O15353 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.91□□□□□ -1.78
FOXN1O15353 COX6CP3-201ENST00000580869 223 ntBASIC3.91□□□□□ -1.78
FOXN1O15353 AC024619.4-201ENST00000580924 316 ntBASIC3.91□□□□□ -1.78
FOXN1O15353 AC025946.2-201ENST00000603398 234 ntBASIC3.91□□□□□ -1.78
FOXN1O15353 AC104695.3-201ENST00000604052 296 ntBASIC3.91□□□□□ -1.78
FOXN1O15353 AC018889.1-201ENST00000605372 397 ntBASIC3.91□□□□□ -1.78
FOXN1O15353 PRR13P7-201ENST00000605538 430 ntBASIC3.91□□□□□ -1.78
FOXN1O15353 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.91□□□□□ -1.78
FOXN1O15353 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXN1O15353 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXN1O15353 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.9□□□□□ -1.78
FOXN1O15353 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.78
FOXN1O15353 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.9□□□□□ -1.78
FOXN1O15353 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.9□□□□□ -1.78
FOXN1O15353 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.9□□□□□ -1.78
FOXN1O15353 RNU6-179P-201ENST00000363350 107 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 DEFB109C-201ENST00000382575 264 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 DEFB109B-201ENST00000382656 264 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 Y_RNA.455-201ENST00000384230 98 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 RNU6-1226P-201ENST00000384317 107 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 RNU4-70P-201ENST00000384579 139 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 RNU6-278P-201ENST00000390945 109 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 EIF4E2P1-201ENST00000393781 255 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 RNU2-36P-201ENST00000410361 191 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 RNA5SP184-201ENST00000411071 108 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.9□□□□□ -1.79
FOXN1O15353 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.9□□□□□ -1.79
FOXN1O15353 AL357552.1-201ENST00000445254 415 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.9□□□□□ -1.79
FOXN1O15353 CEACAMP4-201ENST00000457676 421 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 AC087385.1-201ENST00000475062 312 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.9□□□□□ -1.79
FOXN1O15353 AC132942.1-201ENST00000486753 483 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 AC016065.2-201ENST00000514530 444 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 AC087854.1-201ENST00000519706 414 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.9□□□□□ -1.79
FOXN1O15353 OR11H5P-201ENST00000554039 926 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.9□□□□□ -1.79
FOXN1O15353 ELOCP29-201ENST00000588193 334 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 AC005357.1-201ENST00000588399 301 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 AP001486.3-201ENST00000615334 372 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 PLCE1P1-201ENST00000622094 305 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 AC025034.2-201ENST00000623264 286 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 AL136313.1-201ENST00000624804 202 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
FOXN1O15353 AL513302.2-201ENST00000562313 1842 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.9□□□□□ -1.79
FOXN1O15353 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
FOXN1O15353 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
FOXN1O15353 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
FOXN1O15353 Z73965.1-201ENST00000623412 2297 ntBASIC3.9□□□□□ -1.79
FOXN1O15353 ZNF519P1-201ENST00000449011 1626 ntBASIC3.89□□□□□ -1.79
FOXN1O15353 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
FOXN1O15353 Y_RNA.257-201ENST00000364596 102 ntBASIC3.89□□□□□ -1.79
FOXN1O15353 Y_RNA.307-201ENST00000365022 117 ntBASIC3.89□□□□□ -1.79
FOXN1O15353 Y_RNA.496-201ENST00000384444 101 ntBASIC3.89□□□□□ -1.79
FOXN1O15353 Y_RNA.576-201ENST00000384781 102 ntBASIC3.89□□□□□ -1.79
FOXN1O15353 Y_RNA.645-201ENST00000391229 102 ntBASIC3.89□□□□□ -1.79
FOXN1O15353 AL360182.1-201ENST00000397433 468 ntBASIC3.89□□□□□ -1.79
FOXN1O15353 ATG3P1-201ENST00000419507 911 ntBASIC3.89□□□□□ -1.79
FOXN1O15353 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.89□□□□□ -1.79
FOXN1O15353 DPH3P2-201ENST00000422618 250 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms