Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 BTF3P15-201ENST00000455606 336 ntBASIC3.88□□□□□ -1.79
CBX4O00257 AC006026.2-201ENST00000457376 180 ntBASIC3.88□□□□□ -1.79
CBX4O00257 MIR2053-201ENST00000459295 91 ntBASIC3.88□□□□□ -1.79
CBX4O00257 snoU109.2-201ENST00000459316 135 ntBASIC3.88□□□□□ -1.79
CBX4O00257 U8.21-201ENST00000459536 136 ntBASIC3.88□□□□□ -1.79
CBX4O00257 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.88□□□□□ -1.79
CBX4O00257 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.88□□□□□ -1.79
CBX4O00257 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.88□□□□□ -1.79
CBX4O00257 ELOCP31-201ENST00000540463 467 ntBASIC3.88□□□□□ -1.79
CBX4O00257 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.88□□□□□ -1.79
CBX4O00257 LINC00933-203ENST00000559812 219 ntBASIC3.88□□□□□ -1.79
CBX4O00257 AC090877.1-201ENST00000561418 344 ntBASIC3.88□□□□□ -1.79
CBX4O00257 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.88□□□□□ -1.79
CBX4O00257 MIR3200-201ENST00000580767 85 ntBASIC3.88□□□□□ -1.79
CBX4O00257 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.88□□□□□ -1.79
CBX4O00257 AC009314.1-201ENST00000603871 304 ntBASIC3.88□□□□□ -1.79
CBX4O00257 AC019176.2-201ENST00000611579 315 ntBASIC3.88□□□□□ -1.79
CBX4O00257 AC004852.3-201ENST00000614131 326 ntBASIC3.88□□□□□ -1.79
CBX4O00257 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.88□□□□□ -1.79
CBX4O00257 SRP72P2-201ENST00000344851 1979 ntBASIC3.88□□□□□ -1.79
CBX4O00257 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CBX4O00257 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CBX4O00257 RNU6-778P-201ENST00000363269 103 ntBASIC3.87□□□□□ -1.79
CBX4O00257 SNORA9-201ENST00000384215 133 ntBASIC3.87□□□□□ -1.79
CBX4O00257 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CBX4O00257 NDUFS5P4-201ENST00000412983 318 ntBASIC3.87□□□□□ -1.79
CBX4O00257 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.87□□□□□ -1.79
CBX4O00257 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.87□□□□□ -1.79
CBX4O00257 AL133396.1-201ENST00000432048 687 ntBASIC3.87□□□□□ -1.79
CBX4O00257 HMGN2P31-201ENST00000432430 273 ntBASIC3.87□□□□□ -1.79
CBX4O00257 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.87□□□□□ -1.79
CBX4O00257 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.87□□□□□ -1.79
CBX4O00257 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.87□□□□□ -1.79
CBX4O00257 RPL30P14-201ENST00000482744 348 ntBASIC3.87□□□□□ -1.79
CBX4O00257 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.87□□□□□ -1.79
CBX4O00257 AK3P2-201ENST00000507976 429 ntBASIC3.87□□□□□ -1.79
CBX4O00257 RAC1P2-201ENST00000511164 579 ntBASIC3.87□□□□□ -1.79
CBX4O00257 SMURF2P1-201ENST00000514992 481 ntBASIC3.87□□□□□ -1.79
CBX4O00257 RNU6-377P-201ENST00000515965 102 ntBASIC3.87□□□□□ -1.79
CBX4O00257 RNA5SP208-201ENST00000516156 78 ntBASIC3.87□□□□□ -1.79
CBX4O00257 RNU6-928P-201ENST00000516876 104 ntBASIC3.87□□□□□ -1.79
CBX4O00257 Y_RNA.711-201ENST00000516993 102 ntBASIC3.87□□□□□ -1.79
CBX4O00257 AC007991.1-201ENST00000522680 631 ntBASIC3.87□□□□□ -1.79
CBX4O00257 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.87□□□□□ -1.79
CBX4O00257 CYCSP39-201ENST00000565821 309 ntBASIC3.87□□□□□ -1.79
CBX4O00257 AC109446.1-201ENST00000566172 220 ntBASIC3.87□□□□□ -1.79
CBX4O00257 AC006504.6-201ENST00000590142 199 ntBASIC3.87□□□□□ -1.79
CBX4O00257 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.87□□□□□ -1.79
CBX4O00257 AC018889.1-201ENST00000605372 397 ntBASIC3.87□□□□□ -1.79
CBX4O00257 HMGB1P50-201ENST00000605814 607 ntBASIC3.87□□□□□ -1.79
CBX4O00257 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.87□□□□□ -1.79
CBX4O00257 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CBX4O00257 uc_338.22-201ENST00000622722 187 ntBASIC3.87□□□□□ -1.79
CBX4O00257 AC007823.1-201ENST00000569932 1566 ntBASIC3.87□□□□□ -1.79
CBX4O00257 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CBX4O00257 AC007656.2-201ENST00000624902 4547 ntBASIC3.87□□□□□ -1.79
CBX4O00257 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.86□□□□□ -1.79
CBX4O00257 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.86□□□□□ -1.79
CBX4O00257 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
CBX4O00257 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CBX4O00257 AC008725.1-201ENST00000605123 2263 ntBASIC3.86□□□□□ -1.79
CBX4O00257 RPL9P7-201ENST00000330965 580 ntBASIC3.86□□□□□ -1.79
CBX4O00257 RNU6-1059P-201ENST00000363752 98 ntBASIC3.86□□□□□ -1.79
CBX4O00257 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CBX4O00257 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CBX4O00257 AL513475.1-201ENST00000406602 315 ntBASIC3.86□□□□□ -1.79
CBX4O00257 U3.37-201ENST00000408528 213 ntBASIC3.86□□□□□ -1.79
CBX4O00257 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.86□□□□□ -1.79
CBX4O00257 AL117339.3-201ENST00000418733 162 ntBASIC3.86□□□□□ -1.79
CBX4O00257 AL139247.1-201ENST00000422768 325 ntBASIC3.86□□□□□ -1.79
CBX4O00257 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.86□□□□□ -1.79
CBX4O00257 AL513043.1-201ENST00000439124 535 ntBASIC3.86□□□□□ -1.79
CBX4O00257 SNORA71B-202ENST00000439232 272 ntBASIC3.86□□□□□ -1.79
CBX4O00257 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.86□□□□□ -1.79
CBX4O00257 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.86□□□□□ -1.79
CBX4O00257 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.86□□□□□ -1.79
CBX4O00257 AL590664.1-201ENST00000448065 339 ntBASIC3.86□□□□□ -1.79
CBX4O00257 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.86□□□□□ -1.79
CBX4O00257 RPL26P9-201ENST00000457466 433 ntBASIC3.86□□□□□ -1.79
CBX4O00257 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.86□□□□□ -1.79
CBX4O00257 RPL9P9-202ENST00000466501 579 ntBASIC3.86□□□□□ -1.79
CBX4O00257 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.86□□□□□ -1.79
CBX4O00257 AL163540.1-201ENST00000485382 386 ntBASIC3.86□□□□□ -1.79
CBX4O00257 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.86□□□□□ -1.79
CBX4O00257 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.86□□□□□ -1.79
CBX4O00257 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.86□□□□□ -1.79
CBX4O00257 HIGD1AP1-201ENST00000550979 275 ntBASIC3.86□□□□□ -1.79
CBX4O00257 MIR3922-201ENST00000585192 84 ntBASIC3.86□□□□□ -1.79
CBX4O00257 AC096577.2-201ENST00000611455 153 ntBASIC3.86□□□□□ -1.79
CBX4O00257 PLCE1P1-201ENST00000622094 305 ntBASIC3.86□□□□□ -1.79
CBX4O00257 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.86□□□□□ -1.79
CBX4O00257 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CBX4O00257 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CBX4O00257 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.86□□□□□ -1.79
CBX4O00257 AC002546.1-201ENST00000588041 2504 ntBASIC3.86□□□□□ -1.79
CBX4O00257 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CBX4O00257 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CBX4O00257 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CBX4O00257 FAM35DP-201ENST00000323387 2712 ntBASIC3.86□□□□□ -1.79
CBX4O00257 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms