Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC188H7C350 MIR4528-201ENST00000577763 90 ntBASIC2.67□□□□□ -1.98
CCDC188H7C350 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.67□□□□□ -1.98
CCDC188H7C350 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC188H7C350 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC188H7C350 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
CCDC188H7C350 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC188H7C350 Y_RNA.359-201ENST00000365498 102 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 Z98749.2-208ENST00000381646 500 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 RNU1-109P-201ENST00000383960 147 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 RNU6-748P-201ENST00000384648 107 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 MIR454-201ENST00000390180 115 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CCDC188H7C350 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CCDC188H7C350 RPL21P90-201ENST00000415692 466 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC188H7C350 AL365338.1-201ENST00000422282 858 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 AC087499.2-201ENST00000432861 149 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC188H7C350 S100A11P2-201ENST00000467589 312 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 RPS3AP14-201ENST00000483907 780 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 HMGB1P30-201ENST00000492455 606 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 RPL22P13-201ENST00000493291 347 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 AC117522.2-201ENST00000510049 657 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 AC114781.4-201ENST00000513707 639 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 RNA5SP341-201ENST00000516261 117 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 CKS1BP7-201ENST00000522230 235 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 AC092325.1-201ENST00000566449 554 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC188H7C350 MIR3616-201ENST00000584070 92 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 AL356280.1-201ENST00000603614 379 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 uc_338.14-201ENST00000613162 166 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 AC091834.1-201ENST00000614543 472 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 ATP5A1P2-202ENST00000616464 443 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 MIR6852-201ENST00000621699 66 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC188H7C350 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC188H7C350 AC080128.1-201ENST00000474389 1917 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 CDC27P3-201ENST00000635418 1910 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 AL359854.1-201ENST00000614203 1594 ntBASIC2.66□□□□□ -1.98
CCDC188H7C350 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.65□□□□□ -1.98
CCDC188H7C350 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CCDC188H7C350 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
CCDC188H7C350 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CCDC188H7C350 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC188H7C350 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 Y_RNA.296-201ENST00000364930 108 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 RNU1-140P-201ENST00000365040 165 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 SNORD115-7-201ENST00000365306 82 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 RNU6-1042P-201ENST00000384204 107 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 SNORD116-1-201ENST00000384335 95 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 AL162578.1-201ENST00000406202 378 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 AL513475.1-201ENST00000406602 315 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 OR6C66P-201ENST00000414917 930 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 AC016831.2-201ENST00000417179 352 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC188H7C350 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC188H7C350 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC188H7C350 AL627311.1-201ENST00000431514 115 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 MYL8P-204ENST00000431574 518 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC188H7C350 RPS15AP9-201ENST00000439856 381 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC188H7C350 AL162395.1-201ENST00000457882 422 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC188H7C350 snoU109.2-201ENST00000459316 135 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 RPS3AP17-201ENST00000472594 777 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC188H7C350 AC022493.1-201ENST00000492984 337 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 RPL23AP94-201ENST00000512518 302 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 SNORA25.11-201ENST00000515935 105 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 RNA5SP112-201ENST00000515937 99 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 RPPH1-2P-201ENST00000516688 293 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC188H7C350 MTCO2P4-201ENST00000517968 247 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC188H7C350 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC188H7C350 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC188H7C350 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC188H7C350 AC104237.2-201ENST00000612456 443 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 AC092656.1-203ENST00000624134 423 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC188H7C350 MIR7157-201ENST00000635801 60 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 AC010329.5-201ENST00000623497 2174 ntBASIC2.65□□□□□ -1.99
CCDC188H7C350 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC188H7C350 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC188H7C350 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC188H7C350 MTND4P27-201ENST00000450813 1354 ntBASIC2.64□□□□□ -1.99
CCDC188H7C350 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC188H7C350 SNORA75B-201ENST00000384053 137 ntBASIC2.64□□□□□ -1.99
CCDC188H7C350 RNU6-1029P-201ENST00000384109 107 ntBASIC2.64□□□□□ -1.99
CCDC188H7C350 MIR578-201ENST00000384828 96 ntBASIC2.64□□□□□ -1.99
CCDC188H7C350 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC188H7C350 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC188H7C350 AL356057.3-201ENST00000402607 340 ntBASIC2.64□□□□□ -1.99
CCDC188H7C350 HMGN2P35-201ENST00000412164 270 ntBASIC2.64□□□□□ -1.99
CCDC188H7C350 AL592148.1-201ENST00000413568 445 ntBASIC2.64□□□□□ -1.99
CCDC188H7C350 MTCO3P5-201ENST00000433620 714 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms