Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 MIR30E-201ENST00000362104 92 ntBASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 Y_RNA.146-201ENST00000363549 102 ntBASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 RNA5SP267-201ENST00000364893 126 ntBASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 AP002088.1-201ENST00000382740 395 ntBASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 MIR491-201ENST00000384877 84 ntBASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 MIR548P-201ENST00000408336 84 ntBASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 AL645568.3-201ENST00000433683 316 ntBASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 U3.44-201ENST00000458938 192 ntBASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 AC011005.2-201ENST00000487324 359 ntBASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 AC092436.3-201ENST00000511788 257 ntBASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 RNA5SP309-201ENST00000516670 106 ntBASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 RNU1-54P-201ENST00000517181 120 ntBASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 RN7SKP289-201ENST00000517244 295 ntBASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 AL080274.1-201ENST00000605565 220 ntBASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 PART1_1.1-201ENST00000611761 217 ntBASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 AC091953.5-201ENST00000622919 233 ntBASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
PTPDC1A2A3K4 MTND4P27-201ENST00000450813 1354 ntBASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 AL049781.1-201ENST00000623195 3585 ntBASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 MIR369-201ENST00000362155 70 ntBASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 RNU1-33P-201ENST00000364249 162 ntBASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 DEFB109C-201ENST00000382575 264 ntBASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 DEFB109B-201ENST00000382656 264 ntBASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 SNORA9-201ENST00000384215 133 ntBASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 NDUFB1P2-201ENST00000449477 176 ntBASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 ELOCP24-201ENST00000456370 334 ntBASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 RPL21P13-201ENST00000488305 481 ntBASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 RPL30P5-201ENST00000494923 336 ntBASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 MTCYBP40-201ENST00000509390 1135 ntBASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 AC093303.1-201ENST00000514549 295 ntBASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 RNU2-58P-201ENST00000516403 183 ntBASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 SNORA70.19-201ENST00000516717 90 ntBASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 MIR2276-201ENST00000516886 89 ntBASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 OR1M4P-201ENST00000589199 287 ntBASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 AC136601.2-201ENST00000604356 474 ntBASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 AC133104.2-201ENST00000615272 193 ntBASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 MIR8058-201ENST00000615737 89 ntBASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 AC032011.1-201ENST00000611703 1549 ntBASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.03□□□□□ -1.76
PTPDC1A2A3K4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 SNORD3E-201ENST00000362899 217 ntBASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 Y_RNA.162-201ENST00000363683 102 ntBASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 RNU6-1329P-201ENST00000365664 107 ntBASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 RNU6-692P-201ENST00000384496 107 ntBASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 SNORD17-201ENST00000390930 237 ntBASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 RNU6-293P-201ENST00000411259 106 ntBASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 RPS15AP6-201ENST00000420703 385 ntBASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 AC092047.1-201ENST00000424997 240 ntBASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 NDUFB4P6-201ENST00000436819 366 ntBASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 HIGD1AP11-201ENST00000438361 280 ntBASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 BX510359.1-201ENST00000456973 237 ntBASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 RPL30P15-201ENST00000457129 321 ntBASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 Y_RNA.631-201ENST00000459607 101 ntBASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 RPL32P34-201ENST00000486380 400 ntBASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 AC096576.1-201ENST00000489014 359 ntBASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 RNA5SP165-201ENST00000517142 115 ntBASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 AC009902.1-201ENST00000519351 183 ntBASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 AC025755.1-201ENST00000521306 278 ntBASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 AL157817.1-201ENST00000614264 790 ntBASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 U7.8-201ENST00000619968 63 ntBASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PTPDC1A2A3K4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms