Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 AP001148.1-201ENST00000624124 2359 ntBASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 SNORD14B-201ENST00000364533 90 ntBASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 SNORA62.3-201ENST00000365110 153 ntBASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 SNORA7.4-201ENST00000384249 137 ntBASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 MIR200C-201ENST00000384980 68 ntBASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 RPL26P27-201ENST00000414397 437 ntBASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 RN7SL863P-201ENST00000462370 296 ntBASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 RPL7P43-201ENST00000478876 753 ntBASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 MTND3P22-201ENST00000510932 243 ntBASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 AC008549.1-201ENST00000512900 643 ntBASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 RNU6-928P-201ENST00000516876 104 ntBASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 AC069113.1-201ENST00000517763 267 ntBASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 MIR3672-201ENST00000584290 82 ntBASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 MIR3942-201ENST00000585264 109 ntBASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 AC006133.1-201ENST00000617106 264 ntBASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 AC018692.3-201ENST00000623929 123 ntBASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 ZNF826P-207ENST00000622273 1910 ntBASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TCRBV7S3A2A0A539 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 Y_RNA.135-201ENST00000363439 95 ntBASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 Y_RNA.324-201ENST00000365165 102 ntBASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 RNU1-73P-201ENST00000383971 164 ntBASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 MIR450B-201ENST00000401182 78 ntBASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 SKA2P1-201ENST00000425592 390 ntBASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 AL078601.1-201ENST00000444542 271 ntBASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 MRPL50P4-201ENST00000446432 475 ntBASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 AL583843.1-201ENST00000456070 346 ntBASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 AC092798.1-201ENST00000458542 409 ntBASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 SNORA84-201ENST00000459229 133 ntBASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 RPL30P14-201ENST00000482744 348 ntBASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 AC103851.1-201ENST00000506833 274 ntBASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 TBCAP3-201ENST00000512475 312 ntBASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 RN7SKP43-201ENST00000516173 320 ntBASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 RNU6-572P-201ENST00000516724 80 ntBASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 RNU6-256P-201ENST00000516747 97 ntBASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 AC087854.1-201ENST00000519706 414 ntBASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 AC023043.2-201ENST00000589678 1026 ntBASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 AC008962.1-201ENST00000605729 304 ntBASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 AC068831.7-201ENST00000616954 363 ntBASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 TPTEP1-208ENST00000636884 213 ntBASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TCRBV7S3A2A0A539 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 MTND5P19-201ENST00000424872 1794 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 RNU6-884P-201ENST00000363889 107 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 RNU6-128P-201ENST00000383976 107 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 AL122016.1-201ENST00000403365 367 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 NDUFS5P4-201ENST00000412983 318 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 VN1R36P-201ENST00000414936 291 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 AC099548.1-201ENST00000421443 426 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 AC005326.1-201ENST00000429197 123 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 AC009969.1-201ENST00000438726 172 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 HMGB1P18-201ENST00000438801 619 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 AC233279.1-201ENST00000455300 423 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 PPP1R2P5-201ENST00000457256 603 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 RNU7-138P-201ENST00000459479 64 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 MTCO1P29-201ENST00000496868 288 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 AC110794.1-201ENST00000505816 425 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 RNU1-103P-201ENST00000516502 125 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 RNA5SP380-201ENST00000517190 98 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 AC105029.1-201ENST00000520250 669 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 AC005668.1-201ENST00000571142 476 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms