Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.25□□□□□ -2.21
TRAV41A0A0B4J266 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.25□□□□□ -2.21
TRAV41A0A0B4J266 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.25□□□□□ -2.21
TRAV41A0A0B4J266 RNU6-276P-201ENST00000516114 96 ntBASIC1.25□□□□□ -2.21
TRAV41A0A0B4J266 RNU6-678P-201ENST00000516832 109 ntBASIC1.25□□□□□ -2.21
TRAV41A0A0B4J266 ACA59.2-201ENST00000517061 156 ntBASIC1.25□□□□□ -2.21
TRAV41A0A0B4J266 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
TRAV41A0A0B4J266 AC091163.3-201ENST00000518269 1144 ntBASIC1.25□□□□□ -2.21
TRAV41A0A0B4J266 AC079598.5-201ENST00000547460 117 ntBASIC1.25□□□□□ -2.21
TRAV41A0A0B4J266 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.25□□□□□ -2.21
TRAV41A0A0B4J266 MIR4285-201ENST00000581001 85 ntBASIC1.25□□□□□ -2.21
TRAV41A0A0B4J266 MIR4524B-201ENST00000581569 115 ntBASIC1.25□□□□□ -2.21
TRAV41A0A0B4J266 AC126118.1-201ENST00000607744 628 ntBASIC1.25□□□□□ -2.21
TRAV41A0A0B4J266 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.25□□□□□ -2.21
TRAV41A0A0B4J266 MIR6134-201ENST00000617606 109 ntBASIC1.25□□□□□ -2.21
TRAV41A0A0B4J266 AC138627.2-201ENST00000624202 601 ntBASIC1.25□□□□□ -2.21
TRAV41A0A0B4J266 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 RNU1-17P-201ENST00000363022 152 ntBASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 AL136310.1-201ENST00000404926 654 ntBASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 USP9YP6-201ENST00000413550 854 ntBASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 AL353621.1-201ENST00000418219 243 ntBASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 BX510359.4-201ENST00000423750 193 ntBASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 AL513185.2-201ENST00000425543 193 ntBASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 AC104629.1-201ENST00000494226 508 ntBASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 AC016550.1-201ENST00000505348 785 ntBASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 AC116655.1-201ENST00000508324 901 ntBASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 NDUFA5P6-201ENST00000542110 379 ntBASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 AL596327.1-201ENST00000603629 213 ntBASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 AL358072.1-201ENST00000604156 575 ntBASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 AC092953.2-201ENST00000608000 699 ntBASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 AL353997.5-201ENST00000618886 171 ntBASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 U6.99-201ENST00000637524 83 ntBASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 AP000648.3-201ENST00000623539 4507 ntBASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
TRAV41A0A0B4J266 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 RNU1-23P-201ENST00000363361 144 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 RNU6-898P-201ENST00000365627 104 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 RNU6-997P-201ENST00000384725 107 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 MIR518D-201ENST00000385014 87 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 MIR517C-201ENST00000385103 95 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 SNORA67.5-201ENST00000391036 107 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 MIR320C1-201ENST00000408566 88 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 RN7SKP266-201ENST00000410232 287 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 EIF4EP2-201ENST00000422816 654 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 TXNL1P1-201ENST00000429528 554 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 BRK1P2-201ENST00000442875 223 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 AC007327.1-201ENST00000447461 264 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 AC104982.1-201ENST00000478775 574 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 RPL7P43-201ENST00000478876 753 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 AC116353.3-201ENST00000511215 249 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 AC109445.1-201ENST00000512356 383 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 RNU6-467P-201ENST00000517027 110 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 AC010376.1-201ENST00000522101 334 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 AP005435.4-201ENST00000529514 284 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 MTCYBP23-201ENST00000558717 1102 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 MIR3198-2-201ENST00000577868 80 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 NDUFA8P1-201ENST00000605525 367 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 AC034229.4-201ENST00000607861 441 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 AC092125.1-201ENST00000562568 1995 ntBASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
TRAV41A0A0B4J266 RNU6-701P-201ENST00000384059 107 ntBASIC1.22□□□□□ -2.21
TRAV41A0A0B4J266 RNU6-1032P-201ENST00000384100 107 ntBASIC1.22□□□□□ -2.21
TRAV41A0A0B4J266 SNORA67.6-201ENST00000391093 99 ntBASIC1.22□□□□□ -2.21
TRAV41A0A0B4J266 AC078974.1-201ENST00000411597 223 ntBASIC1.22□□□□□ -2.21
TRAV41A0A0B4J266 AC127391.1-201ENST00000411737 98 ntBASIC1.22□□□□□ -2.21
TRAV41A0A0B4J266 OR9R1P-201ENST00000412200 877 ntBASIC1.22□□□□□ -2.21
TRAV41A0A0B4J266 AL353706.1-201ENST00000436728 494 ntBASIC1.22□□□□□ -2.21
TRAV41A0A0B4J266 KATNBL1P6-201ENST00000453433 915 ntBASIC1.22□□□□□ -2.21
TRAV41A0A0B4J266 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.22□□□□□ -2.21
TRAV41A0A0B4J266 AC023790.1-201ENST00000482174 347 ntBASIC1.22□□□□□ -2.21
TRAV41A0A0B4J266 AC023194.1-201ENST00000493084 308 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms