Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 RNU1-58P-201ENST00000362413 163 ntBASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 RNU6-546P-201ENST00000383991 107 ntBASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 RNU6-439P-201ENST00000384188 106 ntBASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 RNU6-14P-201ENST00000384630 106 ntBASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 MIR491-201ENST00000384877 84 ntBASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 Y_RNA.578-201ENST00000390903 88 ntBASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 AL627390.1-201ENST00000396055 340 ntBASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 AL022400.1-201ENST00000423946 935 ntBASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 HMGB1P31-201ENST00000437242 427 ntBASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 AC005908.1-201ENST00000468701 347 ntBASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 RNU6-143P-201ENST00000516942 93 ntBASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 SNORA31.19-201ENST00000517079 126 ntBASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 AP003355.1-201ENST00000518956 587 ntBASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 AP004247.1-201ENST00000531556 1289 ntBASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 CYP2C61P-201ENST00000604072 290 ntBASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 AC010900.2-201ENST00000604508 210 ntBASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 AP001485.1-201ENST00000604799 199 ntBASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 AL022345.1-201ENST00000607292 135 ntBASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 Z82243.1-201ENST00000609432 473 ntBASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 AL136313.1-201ENST00000624804 202 ntBASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 AC090517.3-201ENST00000625170 141 ntBASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 ZNF680P1-201ENST00000436625 1469 ntBASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 MTND5P33-201ENST00000571250 1450 ntBASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
TRAV12-1A0A0B4J245 RBBP8P1-201ENST00000449447 1844 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 DDX43P2-201ENST00000604753 1354 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 MIR186-201ENST00000384988 86 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 MIR1285-1-201ENST00000408593 84 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 RNU2-36P-201ENST00000410361 191 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 RN7SKP284-201ENST00000411002 343 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 MTND4P25-201ENST00000441039 533 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 RPS29P28-201ENST00000446439 141 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 EEF1E1P1-201ENST00000446998 430 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 PTENP1-201ENST00000447117 1215 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 AP000542.1-201ENST00000448473 371 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 PAXBP1P1-201ENST00000449315 447 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 RPS3AP22-201ENST00000488297 769 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 RPL39P36-201ENST00000490784 156 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 MTCO3P27-201ENST00000514397 196 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 RNU6-1028P-201ENST00000517164 93 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 AC090821.2-201ENST00000523552 176 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 BNIP3P27-201ENST00000599991 412 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 BNIP3P9-201ENST00000603714 553 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 AC116312.1-201ENST00000606841 314 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 AL050343.2-201ENST00000607338 280 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 AL133445.2-201ENST00000611191 527 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 AL158163.2-201ENST00000619110 700 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 AC009269.6-201ENST00000621778 588 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 AP003485.1-201ENST00000625093 753 ntBASIC0.89□□□□□ -2.27
TRAV12-1A0A0B4J245 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 RNU6-858P-201ENST00000362436 107 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 RNU6-1010P-201ENST00000362757 107 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 RNU4-13P-201ENST00000364019 141 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 RNU6-701P-201ENST00000384059 107 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 SNORA40.2-201ENST00000390847 128 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 BTF3L4P2-201ENST00000392798 346 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 SNORA3.2-201ENST00000408221 125 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 RNA5SP100-201ENST00000410903 110 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 RNA5SP59-201ENST00000410922 110 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 SRIP3-201ENST00000413200 219 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 RPL30P13-201ENST00000418873 348 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 USP9YP21-201ENST00000420603 432 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AL354941.1-201ENST00000438600 464 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 BTBD7P2-201ENST00000441962 620 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AL078601.1-201ENST00000444542 271 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AL590365.1-201ENST00000450788 243 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 MTCYBP18-201ENST00000501056 747 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 SNORA25.15-201ENST00000516487 89 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 COPS8P3-201ENST00000526024 482 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms