Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 FAM106DP-201ENST00000586416 501 ntBASIC1.29□□□□□ -2.2
SCN10AQ9Y5Y9 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SCN10AQ9Y5Y9 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.29□□□□□ -2.2
SCN10AQ9Y5Y9 SNORA23-201ENST00000365128 182 ntBASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 RNU6-432P-201ENST00000384196 109 ntBASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 AL590084.2-201ENST00000401481 382 ntBASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 AC244636.1-201ENST00000421152 228 ntBASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 RPL23AP6-201ENST00000446637 472 ntBASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 AC002381.1-201ENST00000447049 280 ntBASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 COX6CP18-201ENST00000448769 222 ntBASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 ATG12P2-201ENST00000456830 416 ntBASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 ARL2BPP4-201ENST00000506854 471 ntBASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 RNU6-1261P-201ENST00000517194 104 ntBASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 AC005730.3-201ENST00000583067 366 ntBASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 AL603758.1-201ENST00000618654 241 ntBASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 MTCYBP32-201ENST00000427945 1084 ntBASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 AC010468.3-201ENST00000508225 458 ntBASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 AP005660.1-201ENST00000522972 293 ntBASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 AC090330.1-201ENST00000588646 764 ntBASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 AC083806.3-201ENST00000614016 455 ntBASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 AL357080.1-201ENST00000617394 239 ntBASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 MIR6788-201ENST00000618842 66 ntBASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 AC019226.1-201ENST00000625666 515 ntBASIC1.28□□□□□ -2.2
SCN10AQ9Y5Y9 RNA5SP465-201ENST00000391195 109 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 BTF3P8-201ENST00000414577 526 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 AC027644.1-201ENST00000419595 298 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 AC019178.2-201ENST00000423595 505 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 FO393415.2-201ENST00000480085 343 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 MTCYBP35-201ENST00000503630 1137 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 AC020699.1-201ENST00000505161 445 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 AC008834.1-201ENST00000511612 175 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 RNU5B-3P-201ENST00000516601 115 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 AL121821.2-201ENST00000556081 394 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 MIR16-2-201ENST00000362117 81 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 RNA5SP276-201ENST00000362580 94 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 SNORA8-201ENST00000384574 139 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 RNU6-1300P-201ENST00000391046 108 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 AL160275.3-201ENST00000423876 471 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 DEFB130D-201ENST00000426866 237 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 AC112771.1-201ENST00000463581 102 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 HMGB1P36-201ENST00000487709 576 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 AC110760.3-202ENST00000515177 371 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 AC109329.1-201ENST00000518744 317 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 AC091057.3-201ENST00000602684 733 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 BBIP1P1-201ENST00000602999 279 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 AL078605.1-201ENST00000603529 500 ntBASIC1.27□□□□□ -2.21
SCN10AQ9Y5Y9 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
SCN10AQ9Y5Y9 TPMTP3-201ENST00000411928 735 ntBASIC1.26□□□□□ -2.21
SCN10AQ9Y5Y9 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.26□□□□□ -2.21
SCN10AQ9Y5Y9 RPL30P4-201ENST00000429309 333 ntBASIC1.26□□□□□ -2.21
SCN10AQ9Y5Y9 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.26□□□□□ -2.21
SCN10AQ9Y5Y9 AC013267.1-201ENST00000458227 267 ntBASIC1.26□□□□□ -2.21
SCN10AQ9Y5Y9 HMGB1P35-201ENST00000503360 598 ntBASIC1.26□□□□□ -2.21
SCN10AQ9Y5Y9 FAM206BP-201ENST00000510179 541 ntBASIC1.26□□□□□ -2.21
SCN10AQ9Y5Y9 AP003497.1-201ENST00000528472 562 ntBASIC1.26□□□□□ -2.21
SCN10AQ9Y5Y9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.26□□□□□ -2.21
SCN10AQ9Y5Y9 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.26□□□□□ -2.21
SCN10AQ9Y5Y9 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.26□□□□□ -2.21
SCN10AQ9Y5Y9 LINC00557-201ENST00000563184 1279 ntBASIC1.26□□□□□ -2.21
SCN10AQ9Y5Y9 AC069304.2-201ENST00000605154 435 ntBASIC1.26□□□□□ -2.21
SCN10AQ9Y5Y9 AC107075.1-201ENST00000613695 314 ntBASIC1.26□□□□□ -2.21
SCN10AQ9Y5Y9 AC091965.5-201ENST00000624785 342 ntBASIC1.26□□□□□ -2.21
SCN10AQ9Y5Y9 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SCN10AQ9Y5Y9 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SCN10AQ9Y5Y9 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 MIR126-201ENST00000362291 85 ntBASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 RNU6-28P-201ENST00000362378 107 ntBASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 USP9YP18-201ENST00000425912 695 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 194.2 ms