Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 RNU6-85P-201ENST00000605989 107 ntBASIC3.61□□□□□ -1.83
PCDHA3Q9Y5H8 AL050343.2-201ENST00000607338 280 ntBASIC3.61□□□□□ -1.83
PCDHA3Q9Y5H8 AL442067.2-201ENST00000614033 363 ntBASIC3.61□□□□□ -1.83
PCDHA3Q9Y5H8 MIR8058-201ENST00000615737 89 ntBASIC3.61□□□□□ -1.83
PCDHA3Q9Y5H8 ATP5A1P2-202ENST00000616464 443 ntBASIC3.61□□□□□ -1.83
PCDHA3Q9Y5H8 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHA3Q9Y5H8 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHA3Q9Y5H8 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDHA3Q9Y5H8 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.61□□□□□ -1.83
PCDHA3Q9Y5H8 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
PCDHA3Q9Y5H8 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 AC138393.1-203ENST00000327086 343 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 Y_RNA.58-201ENST00000362807 102 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 RNU6-778P-201ENST00000363269 103 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 Y_RNA.154-201ENST00000363624 102 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 RNY3P1-201ENST00000365085 102 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 RNY3-201ENST00000365484 102 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 Y_RNA.431-201ENST00000384086 102 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 Y_RNA.490-201ENST00000384413 102 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 RPL37P10-201ENST00000412884 288 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 RPL26P27-201ENST00000414397 437 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 ATG3P1-201ENST00000419507 911 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 RPL7P37-201ENST00000425095 738 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 UBE2V1P4-201ENST00000425374 344 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 AC007560.1-201ENST00000426912 237 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 SAR1AP4-201ENST00000429225 591 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 AL645568.3-201ENST00000433683 316 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 SNORA84-201ENST00000459229 133 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 AC104472.2-201ENST00000469035 601 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 MTND4P17-201ENST00000470444 350 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 RPL32P34-201ENST00000486380 400 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 RPS27P27-201ENST00000498779 255 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 HMGN1P13-201ENST00000505795 138 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 HMGN1P11-201ENST00000508668 303 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 AC006445.2-201ENST00000510061 472 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 RN7SKP24-201ENST00000515888 284 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 AP005597.4-201ENST00000526762 229 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 AC025423.5-201ENST00000550230 219 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 IMMP1LP2-201ENST00000552954 492 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 MIR3609-201ENST00000582661 80 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 AL356055.1-201ENST00000602528 446 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 AC016727.1-205ENST00000605437 569 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 AL355365.1-201ENST00000616480 294 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 XIST_intron.1-201ENST00000619444 68 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 AC090574.1-201ENST00000623186 233 ntBASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
PCDHA3Q9Y5H8 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 AC017071.1-201ENST00000564407 2204 ntBASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 RNU6-270P-201ENST00000364131 105 ntBASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 AL359837.1-201ENST00000381357 287 ntBASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 AP000567.1-201ENST00000406413 156 ntBASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 RNA5SP293-201ENST00000410527 113 ntBASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 AL356968.1-201ENST00000416622 474 ntBASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 SKA2P1-201ENST00000425592 390 ntBASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 MTND1P14-201ENST00000427400 950 ntBASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 AC236972.2-201ENST00000434979 310 ntBASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 Y_RNA.632-201ENST00000459189 102 ntBASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 RN7SL542P-201ENST00000467147 294 ntBASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 RNU1-103P-201ENST00000516502 125 ntBASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 AC104027.1-201ENST00000521887 300 ntBASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 HPRT1P3-201ENST00000539521 576 ntBASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 OR1M4P-201ENST00000589199 287 ntBASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 AP000787.2-201ENST00000604432 568 ntBASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 HSPE1P7-201ENST00000604681 321 ntBASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 AC012468.1-201ENST00000604888 430 ntBASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 AC002076.2-201ENST00000617362 122 ntBASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 Z69720.2-201ENST00000624755 279 ntBASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 AC007496.3-201ENST00000624987 3443 ntBASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHA3Q9Y5H8 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.59□□□□□ -1.84
PCDHA3Q9Y5H8 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
PCDHA3Q9Y5H8 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PCDHA3Q9Y5H8 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-1329P-201ENST00000365664 107 ntBASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms