Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC104389.3-201ENST00000445629 235 ntBASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 EIF4EP3-201ENST00000498782 656 ntBASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 AC109927.2-201ENST00000506416 303 ntBASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 MTCO3P28-201ENST00000513351 515 ntBASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 AP003122.3-201ENST00000526316 255 ntBASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 AC084851.1-201ENST00000529105 249 ntBASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 LINC00933-203ENST00000559812 219 ntBASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 AC006362.1-201ENST00000567392 174 ntBASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 MIR3913-1-201ENST00000577744 102 ntBASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 SNORD53-201ENST00000579969 78 ntBASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 RSL24D1P11-201ENST00000591045 491 ntBASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 MIR98-201ENST00000606724 119 ntBASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 AC072046.2-201ENST00000618366 268 ntBASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.65□□□□□ -1.98
PCDHGA1Q9Y5H4 SNORA24.1-201ENST00000384401 135 ntBASIC2.65□□□□□ -1.99
PCDHGA1Q9Y5H4 AC080125.1-201ENST00000414888 684 ntBASIC2.65□□□□□ -1.99
PCDHGA1Q9Y5H4 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.65□□□□□ -1.99
PCDHGA1Q9Y5H4 MTCO2P34-201ENST00000421994 607 ntBASIC2.65□□□□□ -1.99
PCDHGA1Q9Y5H4 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.65□□□□□ -1.99
PCDHGA1Q9Y5H4 AC010095.1-201ENST00000443543 144 ntBASIC2.65□□□□□ -1.99
PCDHGA1Q9Y5H4 RPL22P13-201ENST00000493291 347 ntBASIC2.65□□□□□ -1.99
PCDHGA1Q9Y5H4 AC079140.3-201ENST00000511111 550 ntBASIC2.65□□□□□ -1.99
PCDHGA1Q9Y5H4 AC008413.1-201ENST00000511864 177 ntBASIC2.65□□□□□ -1.99
PCDHGA1Q9Y5H4 AP002963.1-201ENST00000530590 184 ntBASIC2.65□□□□□ -1.99
PCDHGA1Q9Y5H4 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.65□□□□□ -1.99
PCDHGA1Q9Y5H4 HPRT1P3-201ENST00000539521 576 ntBASIC2.65□□□□□ -1.99
PCDHGA1Q9Y5H4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.65□□□□□ -1.99
PCDHGA1Q9Y5H4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.65□□□□□ -1.99
PCDHGA1Q9Y5H4 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.65□□□□□ -1.99
PCDHGA1Q9Y5H4 NBR2-204ENST00000587322 63 ntBASIC2.65□□□□□ -1.99
PCDHGA1Q9Y5H4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.65□□□□□ -1.99
PCDHGA1Q9Y5H4 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.65□□□□□ -1.99
PCDHGA1Q9Y5H4 AL121992.2-201ENST00000606262 256 ntBASIC2.65□□□□□ -1.99
PCDHGA1Q9Y5H4 MIR15A-201ENST00000607334 83 ntBASIC2.65□□□□□ -1.99
PCDHGA1Q9Y5H4 AL512643.1-201ENST00000635735 524 ntBASIC2.65□□□□□ -1.99
PCDHGA1Q9Y5H4 ASNSP3-201ENST00000451989 1306 ntBASIC2.65□□□□□ -1.99
PCDHGA1Q9Y5H4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PCDHGA1Q9Y5H4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 AC103710.2-202ENST00000641454 2853 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 OR56A5-201ENST00000340110 738 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 RNU6-1097P-201ENST00000363586 107 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 RNU6-641P-201ENST00000384006 107 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 MIR504-201ENST00000385065 83 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 MIR147B-201ENST00000390185 80 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 RN7SKP192-201ENST00000411291 327 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 CDK8P2-201ENST00000415020 547 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 PTGES3P4-201ENST00000426243 356 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 GPR143P-201ENST00000434155 205 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 MTATP6P16-201ENST00000434543 526 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 AC079781.2-201ENST00000446424 169 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 FABP5P13-201ENST00000452144 328 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 MTCYBP1-201ENST00000454315 1119 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 MTND4P2-201ENST00000507767 1203 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 AC117522.2-201ENST00000510049 657 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 AC108078.2-201ENST00000510750 236 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 RNA5SP148-201ENST00000516527 94 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 RNU6-1183P-201ENST00000517054 60 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 SCARNA3-201ENST00000517097 143 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 MTCO2P4-201ENST00000517968 247 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 AL121821.2-201ENST00000556081 394 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 AC012213.3-201ENST00000577199 777 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 MIR1273C-201ENST00000578669 77 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 AC098848.2-201ENST00000588023 330 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 AC091152.3-201ENST00000604227 325 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 AL139286.2-201ENST00000606838 396 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 AC245008.1-201ENST00000608123 476 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 AC006566.1-201ENST00000608943 513 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 AL359547.2-201ENST00000615810 418 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 AC099842.1-201ENST00000619919 596 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 CTSLP2-204ENST00000629029 392 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 AC108206.1-201ENST00000570186 4159 ntBASIC2.64□□□□□ -1.99
PCDHGA1Q9Y5H4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 RNU6-108P-201ENST00000365558 107 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 RNU6-748P-201ENST00000384648 107 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 RNU6-1072P-201ENST00000384703 107 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms