Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 RNA5SP383-201ENST00000362934 120 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 RNU6-384P-201ENST00000364900 104 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 MIR627-201ENST00000384979 97 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 RNU6-192P-201ENST00000391253 100 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 SNORA11.1-201ENST00000408133 129 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 AC005019.1-201ENST00000436455 431 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 Z99127.3-201ENST00000448158 395 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 RNU2-69P-201ENST00000516061 100 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 RNU6-581P-201ENST00000516214 105 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 SNORD60.2-201ENST00000516883 86 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 AC069113.1-201ENST00000517763 267 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 RPL7P20-201ENST00000520308 745 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 COX6CP5-201ENST00000527162 228 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 BNIP3P6-201ENST00000549284 499 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 AC009163.5-201ENST00000575421 637 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 AC015917.1-201ENST00000579654 510 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 AC012119.1-201ENST00000603184 222 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 AC004492.1-201ENST00000607036 742 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 AC092954.2-201ENST00000609103 430 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 AC096772.1-201ENST00000609146 564 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 AC084782.3-201ENST00000612282 578 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 AL355365.1-201ENST00000616480 294 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 U4.6-201ENST00000621618 127 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 AL031601.2-202ENST00000622650 282 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 AC138627.2-201ENST00000624202 601 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 AC073476.4-201ENST00000628409 72 ntBASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGB3Q9Y5G1 AC073346.2-201ENST00000624724 2058 ntBASIC3.21□□□□□ -1.89
PCDHGB3Q9Y5G1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 Y_RNA.516-201ENST00000384541 124 ntBASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 RNU2-3P-201ENST00000410144 191 ntBASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 AC126124.2-201ENST00000413542 321 ntBASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 AC012308.1-201ENST00000451232 178 ntBASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 RNU7-167P-201ENST00000459160 62 ntBASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 RN7SL283P-201ENST00000489055 303 ntBASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 MTND3P25-201ENST00000509243 135 ntBASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 RNA5SP401-201ENST00000515920 127 ntBASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 SNORA64.4-201ENST00000516632 81 ntBASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 AC104027.1-201ENST00000521887 300 ntBASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 AC109635.3-201ENST00000529536 185 ntBASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 AC136619.2-201ENST00000563361 631 ntBASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 TPRKBP2-201ENST00000565969 475 ntBASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 MIR3922-201ENST00000585192 84 ntBASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 AC024153.1-201ENST00000603103 365 ntBASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 AC096577.2-201ENST00000611455 153 ntBASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 AC026585.1-201ENST00000619582 524 ntBASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 AL109809.4-201ENST00000603520 2185 ntBASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 AL359854.1-201ENST00000614203 1594 ntBASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHGB3Q9Y5G1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 RNU1-33P-201ENST00000364249 162 ntBASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 Y_RNA.381-201ENST00000365666 102 ntBASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 BTF3P7-201ENST00000407097 488 ntBASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 AL356968.1-201ENST00000416622 474 ntBASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 USP9YP27-201ENST00000418455 438 ntBASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 RPL7P37-201ENST00000425095 738 ntBASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 RPL23AP83-201ENST00000434984 473 ntBASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 RN7SL807P-201ENST00000470923 297 ntBASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 AC006445.1-201ENST00000491925 405 ntBASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 AC018437.1-201ENST00000492214 406 ntBASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 FCF1P8-201ENST00000510322 597 ntBASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 AC074250.1-201ENST00000511117 192 ntBASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 AC114781.4-201ENST00000513707 639 ntBASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 RNU1-86P-201ENST00000516108 154 ntBASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 RNU1-107P-201ENST00000516617 154 ntBASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 RNU6-835P-201ENST00000516974 104 ntBASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 CYCSP27-201ENST00000527643 293 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms