Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 SNORA14.1-201ENST00000516113 141 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 RNU6-677P-201ENST00000516914 101 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 RNU6-840P-201ENST00000517275 65 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 DNAJC8P1-201ENST00000554535 372 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 OR4H12P-201ENST00000556269 907 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 XIAPP1-201ENST00000603162 600 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 AC007619.2-201ENST00000605743 379 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 AC010378.1-201ENST00000619270 362 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 AC091953.5-201ENST00000622919 233 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 MIR4275-201ENST00000636486 87 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 AC006504.1-201ENST00000562493 3666 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 AL391417.1-201ENST00000404100 426 ntBASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 AC092809.3-201ENST00000415453 231 ntBASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 NDUFB1P1-201ENST00000435191 180 ntBASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 AL137792.2-201ENST00000443484 235 ntBASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 U3.44-201ENST00000458938 192 ntBASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 RN7SKP60-201ENST00000516985 239 ntBASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 MIR5692C1-201ENST00000585309 91 ntBASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 AC067852.3-201ENST00000589177 561 ntBASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 AL121655.1-201ENST00000605811 308 ntBASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 AL355810.1-201ENST00000614629 552 ntBASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 SDR42E1P2-201ENST00000614861 481 ntBASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 FAM157A-202ENST00000615155 405 ntBASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 ATP5A1P2-202ENST00000616464 443 ntBASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 AL078596.1-201ENST00000624856 447 ntBASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.09□□□□□ -1.75
CTDP1Q9Y5B0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CTDP1Q9Y5B0 AC103988.1-201ENST00000566382 2177 ntBASIC4.09□□□□□ -1.76
CTDP1Q9Y5B0 RNU6-593P-201ENST00000364716 112 ntBASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 U3.19-201ENST00000390893 196 ntBASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 EI24P2-201ENST00000397776 1076 ntBASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 AL591704.1-201ENST00000432574 275 ntBASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 AL356535.1-201ENST00000440335 398 ntBASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 TXNP1-201ENST00000441872 371 ntBASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 MIR2053-201ENST00000459295 91 ntBASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 AC104472.2-201ENST00000469035 601 ntBASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 AC010265.1-201ENST00000513509 211 ntBASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 RNU2-69P-201ENST00000516061 100 ntBASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 RNU6-1046P-201ENST00000516538 107 ntBASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 RNU6-1213P-201ENST00000517075 94 ntBASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 MIR6128-201ENST00000615528 109 ntBASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 AC090740.1-201ENST00000623193 2262 ntBASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 AL669831.3-213ENST00000636676 183 ntBASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 AL079305.1-201ENST00000623159 3008 ntBASIC4.08□□□□□ -1.76
CTDP1Q9Y5B0 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 AC007656.2-201ENST00000624902 4547 ntBASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 Y_RNA.112-201ENST00000363250 102 ntBASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 RNU6-310P-201ENST00000384655 107 ntBASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 AC113618.1-201ENST00000416747 285 ntBASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 RPL23AP69-201ENST00000431134 458 ntBASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 MTND5P22-201ENST00000458380 195 ntBASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 RNU6-953P-201ENST00000459154 107 ntBASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 AC021146.2-201ENST00000504736 556 ntBASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 RNU6-1069P-201ENST00000516612 133 ntBASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 RNU6-1332P-201ENST00000516666 104 ntBASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 RNU6-323P-201ENST00000521915 107 ntBASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 KLKP1-201ENST00000595979 403 ntBASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 AP000654.2-201ENST00000605633 586 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms