Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 MTND3P17-201ENST00000416968 344 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 AC007560.1-201ENST00000426912 237 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 GPR143P-201ENST00000434155 205 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 MTATP6P16-201ENST00000434543 526 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 AL161651.1-201ENST00000440882 223 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 MTCYBP1-201ENST00000454315 1119 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 AP000705.1-201ENST00000454567 350 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 AC027673.1-201ENST00000456245 405 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 MTCO3P28-201ENST00000513351 515 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 RNU6-572P-201ENST00000516724 80 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 RNU6-410P-201ENST00000517006 107 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 RNU6-1183P-201ENST00000517054 60 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 AC009902.1-201ENST00000519351 183 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 CKS1BP7-201ENST00000522230 235 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 MIR4782-201ENST00000577987 79 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 MIR3117-201ENST00000584034 78 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 AC091152.3-201ENST00000604227 325 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 AC126118.1-201ENST00000607744 628 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 AC012409.4-201ENST00000612923 249 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 AC092608.2-201ENST00000624427 218 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 RNU6-179P-201ENST00000363350 107 ntBASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 RNU6-456P-201ENST00000384493 107 ntBASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 RNA5SP111-201ENST00000411386 101 ntBASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 PTGES3P4-201ENST00000426243 356 ntBASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 AL358934.1-201ENST00000432346 324 ntBASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 AP000852.1-201ENST00000472460 573 ntBASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 AC093534.1-201ENST00000504977 132 ntBASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 AC116562.3-201ENST00000506136 177 ntBASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 RBBP4P6-201ENST00000508098 202 ntBASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 MTCYBP20-201ENST00000524239 1129 ntBASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 AP001646.1-201ENST00000527936 915 ntBASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 AC068587.5-201ENST00000528506 175 ntBASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 AL157871.3-201ENST00000557231 293 ntBASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 MIR4528-201ENST00000577763 90 ntBASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 AP005136.1-201ENST00000579765 429 ntBASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 MIR4513-201ENST00000581077 86 ntBASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 PIGPP4-201ENST00000584447 307 ntBASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 DEFB131E-202ENST00000602581 683 ntBASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 AL139286.2-201ENST00000606838 396 ntBASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 AC024940.5-201ENST00000622889 474 ntBASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 AC025034.2-201ENST00000623264 286 ntBASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 AL157786.1-207ENST00000627771 695 ntBASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 CKAP2P1-201ENST00000555477 2049 ntBASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 AC004944.1-201ENST00000517807 3059 ntBASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
ATG4BQ9Y4P1 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 MTND4P27-201ENST00000450813 1354 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 SNORA25.6-201ENST00000364121 118 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 RNU6-282P-201ENST00000365357 103 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 RNU6-395P-201ENST00000365662 106 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 SNORA75-201ENST00000384158 137 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 RNU6-748P-201ENST00000384648 107 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 SNORA40C-201ENST00000391285 128 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 AL139039.1-201ENST00000401900 692 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 MTND4P32-201ENST00000437189 1237 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 AC079448.1-201ENST00000449377 373 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 EEF1B2P7-201ENST00000451177 676 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 SRIP1-201ENST00000489235 288 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 GZMAP1-201ENST00000503054 631 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 MTND4P2-201ENST00000507767 1203 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 RNU4-29P-201ENST00000515943 174 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 RNU6-430P-201ENST00000517078 107 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 SNORA31.19-201ENST00000517079 126 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 OR5BN1P-201ENST00000532955 829 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 LINC00933-203ENST00000559812 219 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms