Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 snoU13.18-201ENST00000459483 104 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 RPS27P22-201ENST00000478056 241 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 AC108729.1-201ENST00000487812 947 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 AC113420.1-201ENST00000507903 571 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 SCARNA15.2-201ENST00000516409 127 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 DEFB108E-201ENST00000524692 240 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 AC006199.1-201ENST00000548728 219 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 SULT1C2P1-202ENST00000562418 459 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 AC087045.1-201ENST00000605856 382 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 AC004775.1-201ENST00000607389 753 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 FTX_3.1-201ENST00000610451 147 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 AL365204.3-201ENST00000612448 685 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 AC106730.3-201ENST00000624568 641 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 AL109659.3-201ENST00000624985 950 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 AC099654.5-201ENST00000636479 350 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 AC068700.1-201ENST00000565862 3754 ntBASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 OR4G2P-201ENST00000328113 903 ntBASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 RNA5SP347-201ENST00000362445 119 ntBASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 RNY1P14-201ENST00000384426 108 ntBASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 MIR649-201ENST00000384843 97 ntBASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 MIR597-201ENST00000384968 97 ntBASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 AC010385.1-201ENST00000412374 256 ntBASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 AC098831.1-201ENST00000440661 216 ntBASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 AC027119.1-201ENST00000440877 241 ntBASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 AL035666.1-201ENST00000446195 348 ntBASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 AL157398.1-201ENST00000452981 186 ntBASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 RPL22P13-201ENST00000493291 347 ntBASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 AC009268.1-201ENST00000561352 1203 ntBASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 SNORA77B-201ENST00000578179 125 ntBASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 AC008088.1-201ENST00000580993 280 ntBASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 MTATP6P3-201ENST00000581686 676 ntBASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 CYP2C61P-201ENST00000604072 290 ntBASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
UBE2D4Q9Y2X8 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
UBE2D4Q9Y2X8 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.36□□□□□ -2.35
UBE2D4Q9Y2X8 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.36□□□□□ -2.35
UBE2D4Q9Y2X8 AL591212.2-201ENST00000433923 257 ntBASIC0.36□□□□□ -2.35
UBE2D4Q9Y2X8 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.36□□□□□ -2.35
UBE2D4Q9Y2X8 RAP1BP2-201ENST00000478270 544 ntBASIC0.36□□□□□ -2.35
UBE2D4Q9Y2X8 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.36□□□□□ -2.35
UBE2D4Q9Y2X8 AC124293.1-201ENST00000530034 493 ntBASIC0.36□□□□□ -2.35
UBE2D4Q9Y2X8 MIR4714-201ENST00000580728 77 ntBASIC0.36□□□□□ -2.35
UBE2D4Q9Y2X8 AC092953.2-201ENST00000608000 699 ntBASIC0.36□□□□□ -2.35
UBE2D4Q9Y2X8 MIR8065-201ENST00000620577 100 ntBASIC0.36□□□□□ -2.35
UBE2D4Q9Y2X8 MIR8063-201ENST00000621930 81 ntBASIC0.36□□□□□ -2.35
UBE2D4Q9Y2X8 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.36□□□□□ -2.35
UBE2D4Q9Y2X8 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
UBE2D4Q9Y2X8 DDX43P2-201ENST00000604753 1354 ntBASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 MIR302D-201ENST00000362275 68 ntBASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 RNU6-1235P-201ENST00000384559 107 ntBASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 RNU6-140P-201ENST00000384566 108 ntBASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 MIR1267-201ENST00000408723 78 ntBASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 RNU2-43P-201ENST00000410306 190 ntBASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 AC139712.2-201ENST00000424302 339 ntBASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 AL392003.1-201ENST00000434394 243 ntBASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 HSPE1P13-201ENST00000451143 297 ntBASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 RNU6-498P-201ENST00000459468 107 ntBASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 BOLA3P3-201ENST00000505182 232 ntBASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 CYP3A52P-201ENST00000563326 91 ntBASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 AP005229.2-201ENST00000609980 697 ntBASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 MIR6515-201ENST00000619843 57 ntBASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
UBE2D4Q9Y2X8 AC009541.1-201ENST00000438279 2662 ntBASIC0.34□□□□□ -2.35
UBE2D4Q9Y2X8 SNORD33-201ENST00000362761 85 ntBASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 RNU1-23P-201ENST00000363361 144 ntBASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 SNORD51-201ENST00000384320 80 ntBASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 Y_RNA.508-201ENST00000384502 114 ntBASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 MIR135A2-201ENST00000384854 100 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms