Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 AC092435.3-201ENST00000565538 3654 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 MTND5P1-201ENST00000445440 1375 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RNU6-858P-201ENST00000362436 107 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RNU6-37P-201ENST00000362692 107 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RNU6-11P-201ENST00000364234 107 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RNU6-522P-201ENST00000364497 107 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RNU6-7-201ENST00000364784 107 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RNU6-8-201ENST00000365467 107 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RNU6-25P-201ENST00000383873 107 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RNU6-1-201ENST00000383898 107 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RNU6-48P-201ENST00000384161 107 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RNU6-36P-201ENST00000384172 107 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RNU6-4P-201ENST00000384205 107 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RNU6-5P-201ENST00000384238 107 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RNU6-3P-201ENST00000384314 107 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RNU6-16P-201ENST00000384385 107 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RNU6-15P-201ENST00000384534 107 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RNU6-2-201ENST00000384627 107 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RNU6-29P-201ENST00000384637 107 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RNU6-9-201ENST00000384776 107 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RNU6-33P-201ENST00000384793 107 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RN7SKP202-201ENST00000410439 330 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 BMS1P22-201ENST00000414726 313 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 TBCAP1-201ENST00000436520 327 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RPS29P7-201ENST00000439662 171 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RPL27AP5-201ENST00000469428 449 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RNA5SP217-201ENST00000515959 91 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 SNORA14.1-201ENST00000516113 141 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 AC069113.1-201ENST00000517763 267 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 CYCSP27-201ENST00000527643 293 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 MIR5685-201ENST00000579080 79 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 AC008121.1-201ENST00000603244 268 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RNU6-6P-201ENST00000606623 107 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 AC002553.4-201ENST00000616896 331 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 RMST_7.1-201ENST00000621935 268 ntBASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRCH1Q9Y2L9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 RNU6-213P-201ENST00000384051 104 ntBASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 RNU6-748P-201ENST00000384648 107 ntBASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 MIR554-201ENST00000384874 96 ntBASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 MIR147B-201ENST00000390185 80 ntBASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 RNU6-332P-201ENST00000391193 108 ntBASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 AL512633.1-201ENST00000399931 655 ntBASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 RNU4-26P-201ENST00000410270 107 ntBASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 Y_RNA.615-201ENST00000410769 117 ntBASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 RNU6-373P-201ENST00000411247 98 ntBASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 AL356968.1-201ENST00000416622 474 ntBASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 AL671855.1-201ENST00000446875 1203 ntBASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 HMGN2P26-201ENST00000463169 339 ntBASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 AC107626.1-201ENST00000471084 183 ntBASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 HMGN1P11-201ENST00000508668 303 ntBASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 AC123912.5-201ENST00000605470 343 ntBASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 AL354798.1-201ENST00000622505 329 ntBASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
LRCH1Q9Y2L9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LRCH1Q9Y2L9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
LRCH1Q9Y2L9 Y_RNA.167-201ENST00000363735 109 ntBASIC3.27□□□□□ -1.89
LRCH1Q9Y2L9 Y_RNA.248-201ENST00000364501 109 ntBASIC3.27□□□□□ -1.89
LRCH1Q9Y2L9 RNU6ATAC-201ENST00000408749 126 ntBASIC3.27□□□□□ -1.89
LRCH1Q9Y2L9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.27□□□□□ -1.89
LRCH1Q9Y2L9 RN7SKP58-201ENST00000411010 305 ntBASIC3.27□□□□□ -1.89
LRCH1Q9Y2L9 RNA5SP344-201ENST00000411081 104 ntBASIC3.27□□□□□ -1.89
LRCH1Q9Y2L9 AL139415.2-201ENST00000431968 163 ntBASIC3.27□□□□□ -1.89
LRCH1Q9Y2L9 HMGB1P31-201ENST00000437242 427 ntBASIC3.27□□□□□ -1.89
LRCH1Q9Y2L9 AC004383.1-201ENST00000438135 289 ntBASIC3.27□□□□□ -1.89
LRCH1Q9Y2L9 NFU1P2-201ENST00000448700 469 ntBASIC3.27□□□□□ -1.89
LRCH1Q9Y2L9 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.27□□□□□ -1.89
LRCH1Q9Y2L9 AC006026.2-201ENST00000457376 180 ntBASIC3.27□□□□□ -1.89
LRCH1Q9Y2L9 AC117503.1-201ENST00000472241 394 ntBASIC3.27□□□□□ -1.89
LRCH1Q9Y2L9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.27□□□□□ -1.89
LRCH1Q9Y2L9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.27□□□□□ -1.89
LRCH1Q9Y2L9 Y_RNA.665-201ENST00000516177 98 ntBASIC3.27□□□□□ -1.89
LRCH1Q9Y2L9 SNORA43.2-201ENST00000516652 128 ntBASIC3.27□□□□□ -1.89
LRCH1Q9Y2L9 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LRCH1Q9Y2L9 AC022695.1-201ENST00000522089 237 ntBASIC3.27□□□□□ -1.89
LRCH1Q9Y2L9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.27□□□□□ -1.89
LRCH1Q9Y2L9 AC023050.3-201ENST00000541142 333 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms