Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 AC005034.5-201ENST00000604219 466 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 AC009570.1-201ENST00000609599 745 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 uc_338.5-201ENST00000611839 155 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 AL390240.1-201ENST00000612950 384 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 AC130324.3-201ENST00000614165 542 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 AC093913.1-201ENST00000614178 329 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 AC004972.1-201ENST00000623934 2209 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 AC007785.2-201ENST00000598627 1916 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 AC005183.1-201ENST00000603687 1979 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 AC058791.1-201ENST00000608412 3198 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 MIR22-201ENST00000362190 85 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 RNU4-82P-201ENST00000362443 140 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 SNORA62.1-201ENST00000364287 154 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 Y_RNA.231-201ENST00000364358 102 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 SNORD15B-201ENST00000384714 146 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 MIR514A2-201ENST00000385131 88 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 MIR514A3-201ENST00000385132 88 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 AL139095.1-201ENST00000404326 391 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 Y_RNA.615-201ENST00000410769 117 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 MTND3P8-201ENST00000412909 339 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 RPS15AP6-201ENST00000420703 385 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 AL645937.1-202ENST00000421799 937 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 UBE2D3P2-201ENST00000424409 445 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 IFNA20P-201ENST00000436840 528 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 RPL32P28-201ENST00000443577 397 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 AC004801.2-202ENST00000463559 283 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 MRPS17P3-201ENST00000465453 385 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 RNU6-277P-201ENST00000516272 106 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 IGHV3-76-201ENST00000522465 295 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 AP005435.4-201ENST00000529514 284 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 HMGB1P14-201ENST00000557424 591 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 AL355375.2-201ENST00000574825 175 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 AC021646.1-201ENST00000605469 484 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 RNU6-89P-201ENST00000606519 100 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 RMST_7.1-201ENST00000621935 268 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 MTND5P42-201ENST00000637720 498 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 AC000403.1-201ENST00000613696 3585 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 AC103710.2-202ENST00000641454 2853 ntBASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SCAF8Q9UPN6 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 RNU6-188P-201ENST00000364207 107 ntBASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 RNU6-14P-201ENST00000384630 106 ntBASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 ERLEC1P1-201ENST00000433806 578 ntBASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 MRPS31P2-201ENST00000451581 518 ntBASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 AC233279.1-201ENST00000455300 423 ntBASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 RPL23AP67-201ENST00000465341 474 ntBASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 AC092436.1-201ENST00000506450 503 ntBASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 RNA5SP367-201ENST00000516557 118 ntBASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 RN7SKP272-201ENST00000516988 232 ntBASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 SCOCP1-201ENST00000554676 349 ntBASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 PSMA3P-201ENST00000555485 635 ntBASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 MIR4742-201ENST00000581069 85 ntBASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 AC078795.3-201ENST00000602913 472 ntBASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 AL359547.2-201ENST00000615810 418 ntBASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 MIR6076-201ENST00000617521 113 ntBASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 MIR1302-1-201ENST00000637932 143 ntBASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SCAF8Q9UPN6 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
SCAF8Q9UPN6 RNU6-552P-201ENST00000362869 119 ntBASIC3.65□□□□□ -1.83
SCAF8Q9UPN6 Y_RNA.67-201ENST00000362870 100 ntBASIC3.65□□□□□ -1.83
SCAF8Q9UPN6 Y_RNA.184-201ENST00000363884 108 ntBASIC3.65□□□□□ -1.83
SCAF8Q9UPN6 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SCAF8Q9UPN6 RNU6-903P-201ENST00000391270 109 ntBASIC3.65□□□□□ -1.83
SCAF8Q9UPN6 NDUFB4P5-201ENST00000415445 361 ntBASIC3.65□□□□□ -1.83
SCAF8Q9UPN6 AL354751.2-201ENST00000415471 210 ntBASIC3.65□□□□□ -1.83
SCAF8Q9UPN6 AC092047.1-201ENST00000424997 240 ntBASIC3.65□□□□□ -1.83
SCAF8Q9UPN6 RPL23AP82-202ENST00000427528 469 ntBASIC3.65□□□□□ -1.83
SCAF8Q9UPN6 CST9LP2-201ENST00000437612 320 ntBASIC3.65□□□□□ -1.83
SCAF8Q9UPN6 Z82210.1-201ENST00000440037 231 ntBASIC3.65□□□□□ -1.83
SCAF8Q9UPN6 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.65□□□□□ -1.83
SCAF8Q9UPN6 CENPBD1P1-201ENST00000464061 469 ntBASIC3.65□□□□□ -1.83
SCAF8Q9UPN6 SNORA19.2-201ENST00000516013 114 ntBASIC3.65□□□□□ -1.83
SCAF8Q9UPN6 RNU4-49P-201ENST00000516080 140 ntBASIC3.65□□□□□ -1.83
SCAF8Q9UPN6 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.65□□□□□ -1.83
SCAF8Q9UPN6 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.65□□□□□ -1.83
SCAF8Q9UPN6 AC024619.4-201ENST00000580924 316 ntBASIC3.65□□□□□ -1.83
SCAF8Q9UPN6 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.65□□□□□ -1.83
SCAF8Q9UPN6 AL160413.1-201ENST00000622780 310 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms