Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC2.59□□□□□ -2
NOTCH3Q9UM47 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC2.59□□□□□ -2
NOTCH3Q9UM47 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
NOTCH3Q9UM47 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
NOTCH3Q9UM47 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.59□□□□□ -2
NOTCH3Q9UM47 MIR422A-201ENST00000362286 90 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 SNORD113-1-201ENST00000365321 69 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 Y_RNA.376-201ENST00000365638 108 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 RNU6-1207P-201ENST00000384343 107 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 Y_RNA.477-201ENST00000384352 108 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 MIR93-201ENST00000385024 80 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 Y_RNA.594-201ENST00000410373 140 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 PSMA2P3-201ENST00000429685 675 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 AL359672.1-201ENST00000442302 409 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 HMGN3P1-201ENST00000453847 193 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.58□□□□□ -2
NOTCH3Q9UM47 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.58□□□□□ -2
NOTCH3Q9UM47 IGKV2-36-201ENST00000519999 223 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 HMGN2P47-201ENST00000559378 272 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 LARP7P3-201ENST00000579888 337 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.58□□□□□ -2
NOTCH3Q9UM47 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.58□□□□□ -2
NOTCH3Q9UM47 AL137790.1-201ENST00000634283 177 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 U6.114-201ENST00000636407 96 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.58□□□□□ -2
NOTCH3Q9UM47 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
NOTCH3Q9UM47 RNU5A-8P-201ENST00000364102 114 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 SNORA75.6-201ENST00000391318 127 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 POLHP1-201ENST00000411806 470 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.58□□□□□ -2
NOTCH3Q9UM47 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.58□□□□□ -2
NOTCH3Q9UM47 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.58□□□□□ -2
NOTCH3Q9UM47 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.58□□□□□ -2
NOTCH3Q9UM47 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.58□□□□□ -2
NOTCH3Q9UM47 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.58□□□□□ -2
NOTCH3Q9UM47 RNU6-120P-201ENST00000516077 103 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 AC103783.1-201ENST00000520506 373 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.58□□□□□ -2
NOTCH3Q9UM47 AC068446.3-201ENST00000555285 382 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 AL360157.1-201ENST00000565962 87 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 AC005899.2-201ENST00000584353 90 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 HSPE1P14-201ENST00000605812 302 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 AC093732.2-201ENST00000607950 274 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.58□□□□□ -2
NOTCH3Q9UM47 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC2.58□□□□□ -2
NOTCH3Q9UM47 AC103705.1-201ENST00000619013 241 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.58□□□□□ -2
NOTCH3Q9UM47 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NOTCH3Q9UM47 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.58□□□□□ -2
NOTCH3Q9UM47 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC2.58□□□□□ -2
NOTCH3Q9UM47 AC009313.2-201ENST00000417893 1941 ntBASIC2.58□□□□□ -2
NOTCH3Q9UM47 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC2.57□□□□□ -2
NOTCH3Q9UM47 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NOTCH3Q9UM47 Y_RNA.314-201ENST00000365114 102 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 RNU6-444P-201ENST00000383988 108 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 RNU6-729P-201ENST00000384399 107 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
NOTCH3Q9UM47 HSPE1P8-201ENST00000406997 288 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.57□□□□□ -2
NOTCH3Q9UM47 MED13P1-201ENST00000428342 171 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 CALM2P2-201ENST00000428512 440 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 FTH1P1-201ENST00000437933 532 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 AP001992.1-205ENST00000462248 379 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 YWHAEP4-201ENST00000505390 198 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
NOTCH3Q9UM47 RNA5SP154-201ENST00000516193 111 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 RNU6-911P-201ENST00000516523 104 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 SNORA40.14-201ENST00000516543 86 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 MIR5692C1-201ENST00000585309 91 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 Z98751.3-201ENST00000604447 521 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 AC073657.2-201ENST00000605661 303 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 AC009229.3-201ENST00000608056 282 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 AL162274.2-201ENST00000614406 332 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 AC127459.3-201ENST00000624328 466 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 AC134882.1-201ENST00000603738 1676 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC2.57□□□□□ -2
NOTCH3Q9UM47 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC2.57□□□□□ -2
NOTCH3Q9UM47 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.57□□□□□ -2
NOTCH3Q9UM47 Z83843.1-201ENST00000604070 3685 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NOTCH3Q9UM47 AC097714.1-201ENST00000511272 1647 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NOTCH3Q9UM47 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 AL139276.1-201ENST00000311910 1001 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.57□□□□□ -2
NOTCH3Q9UM47 Y_RNA.170-201ENST00000363746 110 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 RNU6-61P-201ENST00000365528 109 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 RNU6-662P-201ENST00000384253 104 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 Y_RNA.515-201ENST00000384535 112 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 SNORA41-201ENST00000384675 132 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 MIR1252-201ENST00000408861 65 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 RNA5SP247-201ENST00000411181 105 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 AC017078.1-201ENST00000416146 368 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 AC003685.2-201ENST00000422795 395 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 AC233981.1-201ENST00000423224 461 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 EIF1P2-201ENST00000428233 350 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 AL353705.1-201ENST00000433468 480 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 NDUFB1P1-201ENST00000435191 180 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms