Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC005832.2-201ENST00000538921 1430 ntBASIC0.53□□□□□ -2.33
SCN11AQ9UI33 RNU1-124P-201ENST00000363861 145 ntBASIC0.52□□□□□ -2.33
SCN11AQ9UI33 RNU6-26P-201ENST00000383985 107 ntBASIC0.52□□□□□ -2.33
SCN11AQ9UI33 MIR518A2-201ENST00000384966 87 ntBASIC0.52□□□□□ -2.33
SCN11AQ9UI33 SNORD124-201ENST00000459577 104 ntBASIC0.52□□□□□ -2.33
SCN11AQ9UI33 HMGN1P10-201ENST00000474557 553 ntBASIC0.52□□□□□ -2.33
SCN11AQ9UI33 AC111193.1-201ENST00000504097 155 ntBASIC0.52□□□□□ -2.33
SCN11AQ9UI33 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.52□□□□□ -2.33
SCN11AQ9UI33 ACA64.5-201ENST00000516207 127 ntBASIC0.52□□□□□ -2.33
SCN11AQ9UI33 RNU7-40P-201ENST00000516397 64 ntBASIC0.52□□□□□ -2.33
SCN11AQ9UI33 AC092470.1-201ENST00000546187 132 ntBASIC0.52□□□□□ -2.33
SCN11AQ9UI33 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC0.52□□□□□ -2.33
SCN11AQ9UI33 AL391597.1-201ENST00000618707 694 ntBASIC0.52□□□□□ -2.33
SCN11AQ9UI33 AC083865.1-201ENST00000636634 831 ntBASIC0.52□□□□□ -2.33
SCN11AQ9UI33 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.52□□□□□ -2.33
SCN11AQ9UI33 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
SCN11AQ9UI33 RNU6-105P-201ENST00000363909 104 ntBASIC0.52□□□□□ -2.33
SCN11AQ9UI33 AC006461.1-201ENST00000412637 326 ntBASIC0.52□□□□□ -2.33
SCN11AQ9UI33 AL449283.1-202ENST00000418249 604 ntBASIC0.52□□□□□ -2.33
SCN11AQ9UI33 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.52□□□□□ -2.33
SCN11AQ9UI33 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.52□□□□□ -2.33
SCN11AQ9UI33 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.52□□□□□ -2.33
SCN11AQ9UI33 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.52□□□□□ -2.33
SCN11AQ9UI33 PSMC1P5-201ENST00000512850 177 ntBASIC0.52□□□□□ -2.33
SCN11AQ9UI33 AC021171.1-201ENST00000603137 706 ntBASIC0.52□□□□□ -2.33
SCN11AQ9UI33 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.52□□□□□ -2.33
SCN11AQ9UI33 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.52□□□□□ -2.33
SCN11AQ9UI33 CR769776.1-201ENST00000441254 787 ntBASIC0.51□□□□□ -2.33
SCN11AQ9UI33 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
SCN11AQ9UI33 AC008494.2-201ENST00000514544 370 ntBASIC0.51□□□□□ -2.33
SCN11AQ9UI33 SNORD116-28-201ENST00000516123 91 ntBASIC0.51□□□□□ -2.33
SCN11AQ9UI33 RAB11AP2-201ENST00000545905 639 ntBASIC0.51□□□□□ -2.33
SCN11AQ9UI33 AL359212.1-201ENST00000556608 614 ntBASIC0.51□□□□□ -2.33
SCN11AQ9UI33 AC007151.1-201ENST00000572774 483 ntBASIC0.51□□□□□ -2.33
SCN11AQ9UI33 MIR6718-201ENST00000616153 80 ntBASIC0.51□□□□□ -2.33
SCN11AQ9UI33 MIR561-201ENST00000385216 97 ntBASIC0.5□□□□□ -2.33
SCN11AQ9UI33 RNU6-244P-201ENST00000391028 104 ntBASIC0.5□□□□□ -2.33
SCN11AQ9UI33 RNA5SP25-201ENST00000410815 110 ntBASIC0.5□□□□□ -2.33
SCN11AQ9UI33 AP006587.4-201ENST00000526053 529 ntBASIC0.5□□□□□ -2.33
SCN11AQ9UI33 AC093510.2-201ENST00000562820 896 ntBASIC0.5□□□□□ -2.33
SCN11AQ9UI33 MIR3921-201ENST00000577308 85 ntBASIC0.5□□□□□ -2.33
SCN11AQ9UI33 AL355472.4-201ENST00000610233 626 ntBASIC0.5□□□□□ -2.33
SCN11AQ9UI33 MIR8065-201ENST00000620577 100 ntBASIC0.5□□□□□ -2.33
SCN11AQ9UI33 SNORD1A-201ENST00000364968 72 ntBASIC0.5□□□□□ -2.33
SCN11AQ9UI33 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
SCN11AQ9UI33 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.5□□□□□ -2.33
SCN11AQ9UI33 EIF4EP2-201ENST00000422816 654 ntBASIC0.5□□□□□ -2.33
SCN11AQ9UI33 AC007742.1-201ENST00000425789 329 ntBASIC0.5□□□□□ -2.33
SCN11AQ9UI33 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.5□□□□□ -2.33
SCN11AQ9UI33 ELOCP26-201ENST00000436067 329 ntBASIC0.5□□□□□ -2.33
SCN11AQ9UI33 RSU1P2-202ENST00000437884 485 ntBASIC0.5□□□□□ -2.33
SCN11AQ9UI33 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC0.5□□□□□ -2.33
SCN11AQ9UI33 PRELID3BP1-201ENST00000457142 540 ntBASIC0.5□□□□□ -2.33
SCN11AQ9UI33 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.5□□□□□ -2.33
SCN11AQ9UI33 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.5□□□□□ -2.33
SCN11AQ9UI33 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.5□□□□□ -2.33
SCN11AQ9UI33 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.5□□□□□ -2.33
SCN11AQ9UI33 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.5□□□□□ -2.33
SCN11AQ9UI33 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.5□□□□□ -2.33
SCN11AQ9UI33 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC0.5□□□□□ -2.33
SCN11AQ9UI33 AC010900.2-201ENST00000604508 210 ntBASIC0.5□□□□□ -2.33
SCN11AQ9UI33 AP000238.1-201ENST00000608759 426 ntBASIC0.5□□□□□ -2.33
SCN11AQ9UI33 AL121652.1-201ENST00000608851 448 ntBASIC0.5□□□□□ -2.33
SCN11AQ9UI33 AC106800.4-201ENST00000614905 153 ntBASIC0.5□□□□□ -2.33
SCN11AQ9UI33 RNU6-748P-201ENST00000384648 107 ntBASIC0.49□□□□□ -2.33
SCN11AQ9UI33 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.49□□□□□ -2.33
SCN11AQ9UI33 AL591043.1-201ENST00000432461 424 ntBASIC0.49□□□□□ -2.33
SCN11AQ9UI33 AC104689.1-201ENST00000473356 768 ntBASIC0.49□□□□□ -2.33
SCN11AQ9UI33 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.49□□□□□ -2.33
SCN11AQ9UI33 AP003122.4-201ENST00000530980 758 ntBASIC0.49□□□□□ -2.33
SCN11AQ9UI33 AL132857.1-201ENST00000555180 708 ntBASIC0.49□□□□□ -2.33
SCN11AQ9UI33 MIR4661-201ENST00000582720 75 ntBASIC0.49□□□□□ -2.33
SCN11AQ9UI33 AL158032.1-201ENST00000605401 106 ntBASIC0.49□□□□□ -2.33
SCN11AQ9UI33 MIR5739-201ENST00000619803 80 ntBASIC0.49□□□□□ -2.33
SCN11AQ9UI33 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
SCN11AQ9UI33 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
SCN11AQ9UI33 MIR329-2-201ENST00000385029 84 ntBASIC0.48□□□□□ -2.33
SCN11AQ9UI33 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.48□□□□□ -2.33
SCN11AQ9UI33 Z99497.1-201ENST00000421282 135 ntBASIC0.48□□□□□ -2.33
SCN11AQ9UI33 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.48□□□□□ -2.33
SCN11AQ9UI33 BUD31P2-201ENST00000449374 300 ntBASIC0.48□□□□□ -2.33
SCN11AQ9UI33 RPS27P22-201ENST00000478056 241 ntBASIC0.48□□□□□ -2.33
SCN11AQ9UI33 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.48□□□□□ -2.33
SCN11AQ9UI33 AC034114.1-201ENST00000520293 285 ntBASIC0.48□□□□□ -2.33
SCN11AQ9UI33 AC136628.3-201ENST00000521868 290 ntBASIC0.48□□□□□ -2.33
SCN11AQ9UI33 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.48□□□□□ -2.33
SCN11AQ9UI33 AC006518.2-201ENST00000542513 940 ntBASIC0.48□□□□□ -2.33
SCN11AQ9UI33 AC136932.1-201ENST00000574771 208 ntBASIC0.48□□□□□ -2.33
SCN11AQ9UI33 MIR4802-201ENST00000581881 80 ntBASIC0.48□□□□□ -2.33
SCN11AQ9UI33 AC084824.5-201ENST00000612009 413 ntBASIC0.48□□□□□ -2.33
SCN11AQ9UI33 AC022202.1-201ENST00000613515 211 ntBASIC0.48□□□□□ -2.33
SCN11AQ9UI33 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.48□□□□□ -2.33
SCN11AQ9UI33 RNU6-1083P-201ENST00000384022 107 ntBASIC0.47□□□□□ -2.33
SCN11AQ9UI33 MIR518D-201ENST00000385014 87 ntBASIC0.47□□□□□ -2.33
SCN11AQ9UI33 RNU11-3P-201ENST00000391111 133 ntBASIC0.47□□□□□ -2.33
SCN11AQ9UI33 MTCO1P56-201ENST00000401674 224 ntBASIC0.47□□□□□ -2.33
SCN11AQ9UI33 AL117342.1-201ENST00000404861 406 ntBASIC0.47□□□□□ -2.33
SCN11AQ9UI33 LINC01347-201ENST00000417964 355 ntBASIC0.47□□□□□ -2.33
SCN11AQ9UI33 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.47□□□□□ -2.33
SCN11AQ9UI33 GTF2IP12-201ENST00000456547 356 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms