Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 Y_RNA.149-201ENST00000363558 117 ntBASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 RNU6-213P-201ENST00000384051 104 ntBASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 Y_RNA.455-201ENST00000384230 98 ntBASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 RNU6-325P-201ENST00000411132 105 ntBASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 RPL7P2-201ENST00000427639 268 ntBASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 TOMM20P4-201ENST00000427861 435 ntBASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 AC009237.8-201ENST00000445492 379 ntBASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 RPL17P19-201ENST00000489069 552 ntBASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 UBE2CP3-201ENST00000502715 450 ntBASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 AC109479.2-201ENST00000517842 174 ntBASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 MIR4286-201ENST00000580651 93 ntBASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 PRR13P7-201ENST00000605538 430 ntBASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 Y_RNA.39-201ENST00000362620 98 ntBASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 Y_RNA.577-201ENST00000384794 101 ntBASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 SNORA40C-201ENST00000391285 128 ntBASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 AP000567.1-201ENST00000406413 156 ntBASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 Y_RNA.605-201ENST00000410577 105 ntBASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 Z82210.1-201ENST00000440037 231 ntBASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 RPL21P11-201ENST00000461458 483 ntBASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 PPIAP15-201ENST00000479662 484 ntBASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 AC108043.1-201ENST00000512696 574 ntBASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 AC120057.2-201ENST00000571520 271 ntBASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 AC053481.4-201ENST00000583164 216 ntBASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 AC092447.9-201ENST00000603395 144 ntBASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 AC110741.2-201ENST00000605278 268 ntBASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 AC123912.5-201ENST00000605470 343 ntBASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 AL121917.1-203ENST00000605534 577 ntBASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 FP236240.3-201ENST00000623061 327 ntBASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 AC119674.1-207ENST00000641355 633 ntBASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 AC007785.2-201ENST00000598627 1916 ntBASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PPARGC1AQ9UBK2 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 Y_RNA.527-201ENST00000384573 102 ntBASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 MIR34A-201ENST00000385130 110 ntBASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 AL591034.2-201ENST00000402839 359 ntBASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 AL513475.1-201ENST00000406602 315 ntBASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 RNU2-23P-201ENST00000410545 195 ntBASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 SNORD56-201ENST00000413522 71 ntBASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 PIGFP3-201ENST00000441918 722 ntBASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 AC114801.2-201ENST00000503825 781 ntBASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 RNU1-61P-201ENST00000516107 151 ntBASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 MIR3149-201ENST00000584629 83 ntBASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 AL606490.9-201ENST00000603331 271 ntBASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 NCAPGP1-201ENST00000505112 1814 ntBASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PPARGC1AQ9UBK2 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.03□□□□□ -1.76
PPARGC1AQ9UBK2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.03□□□□□ -1.76
PPARGC1AQ9UBK2 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.03□□□□□ -1.76
PPARGC1AQ9UBK2 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PPARGC1AQ9UBK2 RNA5SP97-201ENST00000365006 84 ntBASIC4.03□□□□□ -1.76
PPARGC1AQ9UBK2 Y_RNA.557-201ENST00000384680 107 ntBASIC4.03□□□□□ -1.76
PPARGC1AQ9UBK2 MIR199A2-201ENST00000385289 110 ntBASIC4.03□□□□□ -1.76
PPARGC1AQ9UBK2 HMGB3P2-201ENST00000411913 584 ntBASIC4.03□□□□□ -1.76
PPARGC1AQ9UBK2 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.03□□□□□ -1.76
PPARGC1AQ9UBK2 AC017083.1-201ENST00000428093 483 ntBASIC4.03□□□□□ -1.76
PPARGC1AQ9UBK2 AC007919.1-201ENST00000429380 217 ntBASIC4.03□□□□□ -1.76
PPARGC1AQ9UBK2 U8.21-201ENST00000459536 136 ntBASIC4.03□□□□□ -1.76
PPARGC1AQ9UBK2 FTH1P2-201ENST00000466086 412 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms