Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 RNU6-19P-201ENST00000384718 107 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 MT-TH-201ENST00000387441 69 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 AC092809.3-201ENST00000415453 231 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 NPM1P11-201ENST00000417106 855 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 Z82209.1-201ENST00000422141 2135 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 MTND6P13-201ENST00000443510 523 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 AC096638.1-201ENST00000444678 216 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 FABP5P13-201ENST00000452144 328 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 AC233279.1-201ENST00000455300 423 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 EIF4EP3-201ENST00000498782 656 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 AC008716.1-201ENST00000511084 513 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 RNU6-572P-201ENST00000516724 80 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 AC009902.1-201ENST00000519351 183 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 AL157871.3-201ENST00000557231 293 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 LINC00933-203ENST00000559812 219 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 AC109446.2-201ENST00000567872 497 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 MYL12BP1-201ENST00000569826 507 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 MIR1273C-201ENST00000578669 77 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 MIR4648-201ENST00000580107 72 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 MIR3682-201ENST00000581338 84 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 AL356280.1-201ENST00000603614 379 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 AL645944.1-201ENST00000603857 493 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 AC091152.3-201ENST00000604227 325 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 AC091304.9-201ENST00000612091 226 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 AL359547.2-201ENST00000615810 418 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 AC025048.6-202ENST00000627667 438 ntBASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.01□□□□□ -2.09
CLCF1Q9UBD9 AC135776.4-201ENST00000624300 1904 ntBASIC2□□□□□ -2.09
CLCF1Q9UBD9 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CLCF1Q9UBD9 RPS3AP36-201ENST00000398190 775 ntBASIC2□□□□□ -2.09
CLCF1Q9UBD9 CYCSP46-201ENST00000423569 204 ntBASIC2□□□□□ -2.09
CLCF1Q9UBD9 PTGES3P4-201ENST00000426243 356 ntBASIC2□□□□□ -2.09
CLCF1Q9UBD9 MED13P1-201ENST00000428342 171 ntBASIC2□□□□□ -2.09
CLCF1Q9UBD9 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2□□□□□ -2.09
CLCF1Q9UBD9 AL121890.1-201ENST00000435457 205 ntBASIC2□□□□□ -2.09
CLCF1Q9UBD9 PGBD4P3-201ENST00000440731 581 ntBASIC2□□□□□ -2.09
CLCF1Q9UBD9 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2□□□□□ -2.09
CLCF1Q9UBD9 AC003071.1-201ENST00000451219 789 ntBASIC2□□□□□ -2.09
CLCF1Q9UBD9 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2□□□□□ -2.09
CLCF1Q9UBD9 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2□□□□□ -2.09
CLCF1Q9UBD9 AC098862.1-201ENST00000504991 413 ntBASIC2□□□□□ -2.09
CLCF1Q9UBD9 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2□□□□□ -2.09
CLCF1Q9UBD9 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2□□□□□ -2.09
CLCF1Q9UBD9 RNU2-46P-201ENST00000517038 113 ntBASIC2□□□□□ -2.09
CLCF1Q9UBD9 SNORA31.19-201ENST00000517079 126 ntBASIC2□□□□□ -2.09
CLCF1Q9UBD9 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2□□□□□ -2.09
CLCF1Q9UBD9 BTF3P12-201ENST00000519620 469 ntBASIC2□□□□□ -2.09
CLCF1Q9UBD9 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2□□□□□ -2.09
CLCF1Q9UBD9 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2□□□□□ -2.09
CLCF1Q9UBD9 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2□□□□□ -2.09
CLCF1Q9UBD9 MIR15A-201ENST00000607334 83 ntBASIC2□□□□□ -2.09
CLCF1Q9UBD9 AL137847.3-201ENST00000611521 109 ntBASIC2□□□□□ -2.09
CLCF1Q9UBD9 uc_338.14-201ENST00000613162 166 ntBASIC2□□□□□ -2.09
CLCF1Q9UBD9 MIR6134-201ENST00000617606 109 ntBASIC2□□□□□ -2.09
CLCF1Q9UBD9 MIR6873-201ENST00000622788 63 ntBASIC2□□□□□ -2.09
CLCF1Q9UBD9 AC120349.3-201ENST00000624377 529 ntBASIC2□□□□□ -2.09
CLCF1Q9UBD9 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2□□□□□ -2.09
CLCF1Q9UBD9 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
CLCF1Q9UBD9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2□□□□□ -2.09
CLCF1Q9UBD9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2□□□□□ -2.09
CLCF1Q9UBD9 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CLCF1Q9UBD9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 MTND4P27-201ENST00000450813 1354 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 Y_RNA.33-201ENST00000362591 102 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 RNU4-21P-201ENST00000362802 126 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 SNORA67.1-201ENST00000364749 141 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 RNU6-395P-201ENST00000365662 106 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 SNORA20.2-201ENST00000383922 131 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 RNU6-39P-201ENST00000384344 107 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 SNORA80E-201ENST00000384744 137 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 MIR558-201ENST00000384920 94 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 MIR221-201ENST00000385135 110 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 MIR147B-201ENST00000390185 80 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 RNU2-39P-201ENST00000410604 198 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 RNU6-1025P-201ENST00000410629 104 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 RNU6-1328P-201ENST00000410938 106 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 AC127391.1-201ENST00000411737 98 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms