Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AC098831.1-201ENST00000440661 216 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 HMGN1P18-201ENST00000457642 277 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 snoU109.2-201ENST00000459316 135 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 MTCO3P38-201ENST00000468910 766 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 RPL21P99-201ENST00000480369 423 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 RNU2-69P-201ENST00000516061 100 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 RNU1-86P-201ENST00000516108 154 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 MIR892C-201ENST00000516410 77 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 RNU1-107P-201ENST00000516617 154 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 SNORD60.2-201ENST00000516883 86 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 AL121821.2-201ENST00000556081 394 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 AC021739.1-201ENST00000559631 174 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 AC092325.1-201ENST00000566449 554 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 AC025281.1-201ENST00000567026 265 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 AC011471.1-201ENST00000585766 187 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 AC010525.2-201ENST00000590920 195 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 AL645944.1-201ENST00000603857 493 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 AP000907.4-201ENST00000604143 237 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 U2.17-201ENST00000611454 95 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 AC007014.2-201ENST00000615581 479 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 RNY3P3-201ENST00000363816 102 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 Y_RNA.256-201ENST00000364594 104 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 RNU4-20P-201ENST00000365601 151 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 MIR34A-201ENST00000385130 110 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 AL592114.1-201ENST00000403842 483 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 RNA5SP229-201ENST00000410809 99 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 Z92545.1-201ENST00000411782 234 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 OR9R1P-201ENST00000412200 877 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 AL353621.1-201ENST00000418219 243 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 AC009414.1-201ENST00000427200 443 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 AC009969.1-201ENST00000438726 172 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 HMGN2P10-201ENST00000448085 265 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 RPS29P12-201ENST00000460178 152 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 RN7SL504P-201ENST00000494496 287 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 CCDC34P1-201ENST00000507441 517 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 RNU6-581P-201ENST00000516214 105 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 MIR5195-201ENST00000583555 115 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 AC005498.1-201ENST00000592125 465 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 AC004520.1-201ENST00000608362 1413 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 Z82243.1-201ENST00000609432 473 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 AL442067.2-201ENST00000614033 363 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 AL031601.2-202ENST00000622650 282 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 AC022418.1-201ENST00000624118 445 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 SNORA50A-202ENST00000629536 136 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 OR4G1P-203ENST00000641984 1631 ntBASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.06□□□□□ -1.92
HCN3Q9P1Z3 AC091564.4-201ENST00000533934 2194 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 SNORD14B-201ENST00000364533 90 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 RNU6-534P-201ENST00000364877 106 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 RNU6-1280P-201ENST00000365211 107 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 RNU6-38P-201ENST00000384085 107 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 RNA5SP219-201ENST00000390940 113 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 SNORA48.8-201ENST00000391324 134 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 MIR1277-201ENST00000408536 78 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 AC016831.2-201ENST00000417179 352 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 AL353678.1-201ENST00000422735 741 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 AL139415.2-201ENST00000431968 163 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 AC092001.1-201ENST00000453012 261 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 RNU6-333P-201ENST00000459117 107 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 RPL23AP11-201ENST00000475260 469 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 AC026801.1-201ENST00000497178 464 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 TBCAP3-201ENST00000512475 312 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 AC006199.1-201ENST00000548728 219 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 AL138976.2-201ENST00000563989 694 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 MIR4424-201ENST00000585257 86 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms