Protein–RNA interactions for Protein: Q9NYV4

CDK12, Cyclin-dependent kinase 12, humanhuman

Predicted RBP Predictions only

Length 1,490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12Q9NYV4 CST2P1-201ENST00000425770 87 ntBASIC1.05□□□□□ -2.24
CDK12Q9NYV4 SUMO2P2-201ENST00000456482 255 ntBASIC1.05□□□□□ -2.24
CDK12Q9NYV4 HMGN1P10-201ENST00000474557 553 ntBASIC1.05□□□□□ -2.24
CDK12Q9NYV4 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.05□□□□□ -2.24
CDK12Q9NYV4 AC008834.1-201ENST00000511612 175 ntBASIC1.05□□□□□ -2.24
CDK12Q9NYV4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.05□□□□□ -2.24
CDK12Q9NYV4 SNORA31.6-201ENST00000516241 130 ntBASIC1.05□□□□□ -2.24
CDK12Q9NYV4 SNORA31.22-201ENST00000517204 135 ntBASIC1.05□□□□□ -2.24
CDK12Q9NYV4 AP003066.2-201ENST00000529375 555 ntBASIC1.05□□□□□ -2.24
CDK12Q9NYV4 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.05□□□□□ -2.24
CDK12Q9NYV4 AC008121.1-201ENST00000603244 268 ntBASIC1.05□□□□□ -2.24
CDK12Q9NYV4 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC1.05□□□□□ -2.24
CDK12Q9NYV4 AC243829.3-201ENST00000622177 108 ntBASIC1.05□□□□□ -2.24
CDK12Q9NYV4 AL118508.4-201ENST00000624142 1176 ntBASIC1.05□□□□□ -2.24
CDK12Q9NYV4 MIR7157-201ENST00000635801 60 ntBASIC1.05□□□□□ -2.24
CDK12Q9NYV4 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
CDK12Q9NYV4 RNU5A-1-201ENST00000362698 116 ntBASIC1.05□□□□□ -2.24
CDK12Q9NYV4 Z99497.1-201ENST00000421282 135 ntBASIC1.05□□□□□ -2.24
CDK12Q9NYV4 AC005345.1-201ENST00000431868 217 ntBASIC1.05□□□□□ -2.24
CDK12Q9NYV4 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.05□□□□□ -2.24
CDK12Q9NYV4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.05□□□□□ -2.24
CDK12Q9NYV4 RNU6-416P-201ENST00000516265 103 ntBASIC1.05□□□□□ -2.24
CDK12Q9NYV4 MIR892C-201ENST00000516410 77 ntBASIC1.05□□□□□ -2.24
CDK12Q9NYV4 MIR3126-201ENST00000577443 74 ntBASIC1.05□□□□□ -2.24
CDK12Q9NYV4 AP001269.3-201ENST00000588718 329 ntBASIC1.05□□□□□ -2.24
CDK12Q9NYV4 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.05□□□□□ -2.24
CDK12Q9NYV4 AP001485.1-201ENST00000604799 199 ntBASIC1.05□□□□□ -2.24
CDK12Q9NYV4 AC069294.1-201ENST00000608397 350 ntBASIC1.05□□□□□ -2.24
CDK12Q9NYV4 MIR6835-201ENST00000621552 64 ntBASIC1.05□□□□□ -2.24
CDK12Q9NYV4 MIR338-201ENST00000636369 67 ntBASIC1.05□□□□□ -2.24
CDK12Q9NYV4 LINC02211-204ENST00000642024 1070 ntBASIC1.05□□□□□ -2.24
CDK12Q9NYV4 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
CDK12Q9NYV4 RNU6-252P-201ENST00000363232 107 ntBASIC1.04□□□□□ -2.24
CDK12Q9NYV4 RNU6-1083P-201ENST00000384022 107 ntBASIC1.04□□□□□ -2.24
CDK12Q9NYV4 AC007742.1-201ENST00000425789 329 ntBASIC1.04□□□□□ -2.24
CDK12Q9NYV4 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.04□□□□□ -2.24
CDK12Q9NYV4 PSMA6P3-201ENST00000428242 164 ntBASIC1.04□□□□□ -2.24
CDK12Q9NYV4 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.04□□□□□ -2.24
CDK12Q9NYV4 ELOCP26-201ENST00000436067 329 ntBASIC1.04□□□□□ -2.24
CDK12Q9NYV4 BLNK-209ENST00000495266 440 ntTSL 5 BASIC1.04□□□□□ -2.24
CDK12Q9NYV4 AC098591.2-201ENST00000510152 315 ntBASIC1.04□□□□□ -2.24
CDK12Q9NYV4 AC022483.1-201ENST00000514020 567 ntBASIC1.04□□□□□ -2.24
CDK12Q9NYV4 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.04□□□□□ -2.24
CDK12Q9NYV4 AC095057.3-201ENST00000567102 1157 ntBASIC1.04□□□□□ -2.24
CDK12Q9NYV4 AL022067.1-201ENST00000602426 454 ntBASIC1.04□□□□□ -2.24
CDK12Q9NYV4 AC022387.2-201ENST00000604050 448 ntBASIC1.04□□□□□ -2.24
CDK12Q9NYV4 AL121652.1-201ENST00000608851 448 ntBASIC1.04□□□□□ -2.24
CDK12Q9NYV4 U4atac.1-201ENST00000618345 95 ntBASIC1.04□□□□□ -2.24
CDK12Q9NYV4 AC073569.3-201ENST00000619055 682 ntBASIC1.04□□□□□ -2.24
CDK12Q9NYV4 MTCO1P18-201ENST00000455518 1419 ntBASIC1.04□□□□□ -2.24
CDK12Q9NYV4 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CDK12Q9NYV4 SNRPEP3-201ENST00000338402 276 ntBASIC1.03□□□□□ -2.24
CDK12Q9NYV4 RNU1-72P-201ENST00000362976 153 ntBASIC1.03□□□□□ -2.24
CDK12Q9NYV4 HMGN2P39-201ENST00000398005 273 ntBASIC1.03□□□□□ -2.24
CDK12Q9NYV4 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.03□□□□□ -2.24
CDK12Q9NYV4 AL590383.1-201ENST00000428602 75 ntBASIC1.03□□□□□ -2.24
CDK12Q9NYV4 RPS15AP5-201ENST00000436276 388 ntBASIC1.03□□□□□ -2.24
CDK12Q9NYV4 RPS20P10-201ENST00000451209 253 ntBASIC1.03□□□□□ -2.24
CDK12Q9NYV4 HMGB1P36-201ENST00000487709 576 ntBASIC1.03□□□□□ -2.24
CDK12Q9NYV4 SCARNA15.2-201ENST00000516409 127 ntBASIC1.03□□□□□ -2.24
CDK12Q9NYV4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.03□□□□□ -2.24
CDK12Q9NYV4 AC107953.1-201ENST00000522216 297 ntBASIC1.03□□□□□ -2.24
CDK12Q9NYV4 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.03□□□□□ -2.24
CDK12Q9NYV4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.03□□□□□ -2.24
CDK12Q9NYV4 AC124947.2-202ENST00000552735 133 ntBASIC1.03□□□□□ -2.24
CDK12Q9NYV4 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.03□□□□□ -2.24
CDK12Q9NYV4 BX322635.1-201ENST00000605804 496 ntBASIC1.03□□□□□ -2.24
CDK12Q9NYV4 U3.13-201ENST00000364804 214 ntBASIC1.02□□□□□ -2.25
CDK12Q9NYV4 RNU6-140P-201ENST00000384566 108 ntBASIC1.02□□□□□ -2.25
CDK12Q9NYV4 RNU2-49P-201ENST00000410666 184 ntBASIC1.02□□□□□ -2.25
CDK12Q9NYV4 BPY2DP-201ENST00000422208 265 ntBASIC1.02□□□□□ -2.25
CDK12Q9NYV4 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.02□□□□□ -2.25
CDK12Q9NYV4 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.02□□□□□ -2.25
CDK12Q9NYV4 MED14P1-201ENST00000430517 648 ntBASIC1.02□□□□□ -2.25
CDK12Q9NYV4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.02□□□□□ -2.25
CDK12Q9NYV4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.02□□□□□ -2.25
CDK12Q9NYV4 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.02□□□□□ -2.25
CDK12Q9NYV4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.02□□□□□ -2.25
CDK12Q9NYV4 RNU6-351P-201ENST00000516097 100 ntBASIC1.02□□□□□ -2.25
CDK12Q9NYV4 RNU6-1256P-201ENST00000516539 103 ntBASIC1.02□□□□□ -2.25
CDK12Q9NYV4 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.02□□□□□ -2.25
CDK12Q9NYV4 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.02□□□□□ -2.25
CDK12Q9NYV4 AL078605.1-201ENST00000603529 500 ntBASIC1.02□□□□□ -2.25
CDK12Q9NYV4 AC021646.1-201ENST00000605469 484 ntBASIC1.02□□□□□ -2.25
CDK12Q9NYV4 AL589743.7-201ENST00000612637 233 ntBASIC1.02□□□□□ -2.25
CDK12Q9NYV4 AP003476.1-201ENST00000623984 516 ntBASIC1.02□□□□□ -2.25
CDK12Q9NYV4 ELL2P3-201ENST00000457883 1602 ntBASIC1.02□□□□□ -2.25
CDK12Q9NYV4 MIR26B-201ENST00000362251 77 ntBASIC1.01□□□□□ -2.25
CDK12Q9NYV4 RNU6-884P-201ENST00000363889 107 ntBASIC1.01□□□□□ -2.25
CDK12Q9NYV4 SNORA27.3-201ENST00000364937 134 ntBASIC1.01□□□□□ -2.25
CDK12Q9NYV4 Y_RNA.549-201ENST00000384657 102 ntBASIC1.01□□□□□ -2.25
CDK12Q9NYV4 MIR514A1-201ENST00000385133 98 ntBASIC1.01□□□□□ -2.25
CDK12Q9NYV4 AL589655.1-201ENST00000405398 482 ntBASIC1.01□□□□□ -2.25
CDK12Q9NYV4 MIR1265-201ENST00000408444 86 ntBASIC1.01□□□□□ -2.25
CDK12Q9NYV4 RN7SKP61-201ENST00000410642 295 ntBASIC1.01□□□□□ -2.25
CDK12Q9NYV4 USP9YP19-201ENST00000412165 485 ntBASIC1.01□□□□□ -2.25
CDK12Q9NYV4 AC019070.1-201ENST00000415008 1024 ntBASIC1.01□□□□□ -2.25
CDK12Q9NYV4 USP9YP13-201ENST00000417797 480 ntBASIC1.01□□□□□ -2.25
CDK12Q9NYV4 PNRC2P1-201ENST00000423940 420 ntBASIC1.01□□□□□ -2.25
CDK12Q9NYV4 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms