Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RNU6-835P-201ENST00000516974 104 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.61□□□□□ -1.99
NDE1Q9NXR1 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.61□□□□□ -1.99
NDE1Q9NXR1 PSMA2P1-201ENST00000526365 646 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 AP005435.4-201ENST00000529514 284 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.61□□□□□ -1.99
NDE1Q9NXR1 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.61□□□□□ -1.99
NDE1Q9NXR1 MIR5583-1-201ENST00000580941 59 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.61□□□□□ -1.99
NDE1Q9NXR1 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.61□□□□□ -1.99
NDE1Q9NXR1 BNIP3P30-201ENST00000601184 574 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 AP000907.4-201ENST00000604143 237 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 AL161798.1-201ENST00000604630 131 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 AL442067.2-201ENST00000614033 363 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 AC034102.8-201ENST00000615146 484 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 AC005858.4-201ENST00000623191 700 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.61□□□□□ -1.99
NDE1Q9NXR1 MTND1P37-201ENST00000636562 264 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 U6.105-201ENST00000637379 88 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 MIR1321-201ENST00000637766 79 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
NDE1Q9NXR1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NDE1Q9NXR1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
NDE1Q9NXR1 CKAP2P1-201ENST00000555477 2049 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AL354685.2-201ENST00000448218 1447 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AC007785.2-201ENST00000598627 1916 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NDE1Q9NXR1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.6□□□□□ -1.99
NDE1Q9NXR1 RNU6-552P-201ENST00000362869 119 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 RNU6-1287P-201ENST00000362914 107 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 RNU6-741P-201ENST00000383889 107 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 RNU6-116P-201ENST00000384042 109 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 RNU6-1060P-201ENST00000384664 107 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 RNU6-817P-201ENST00000391083 104 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 RNA5SP252-201ENST00000391131 119 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NDE1Q9NXR1 RNU6-908P-201ENST00000410160 94 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 RNU2-33P-201ENST00000410344 192 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 RNU6-1068P-201ENST00000410958 103 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 RNA5SP111-201ENST00000411386 101 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AL109913.1-201ENST00000421173 514 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 MTCYBP5-201ENST00000423752 1135 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AL590383.1-201ENST00000428602 75 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AC097713.2-201ENST00000430199 356 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 MRPS10P2-201ENST00000431226 381 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AL512844.2-201ENST00000433990 593 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.6□□□□□ -1.99
NDE1Q9NXR1 CYCSP32-201ENST00000440548 321 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 DDX3P2-201ENST00000446138 111 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 MTND1P18-201ENST00000448191 573 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 RPL37P4-201ENST00000448908 268 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.6□□□□□ -1.99
NDE1Q9NXR1 RNU6-953P-201ENST00000459154 107 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.6□□□□□ -1.99
NDE1Q9NXR1 MTCO3P38-201ENST00000468910 766 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 SUMO2P6-201ENST00000505273 288 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.6□□□□□ -1.99
NDE1Q9NXR1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AC091826.1-201ENST00000514065 313 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.6□□□□□ -1.99
NDE1Q9NXR1 SCGB1D5P-201ENST00000515134 247 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 RN7SKP219-201ENST00000516825 296 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 RNA5SP290-201ENST00000517133 127 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 RNA5SP402-201ENST00000517148 110 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AC109635.3-201ENST00000529536 185 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 OR5BN1P-201ENST00000532955 829 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AL512310.1-201ENST00000548639 172 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 ADI1P3-201ENST00000549509 470 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AL157687.1-201ENST00000554853 619 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 TRAV28-201ENST00000557548 323 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.6□□□□□ -1.99
NDE1Q9NXR1 MIR4703-201ENST00000577728 79 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AC010620.2-201ENST00000600135 313 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AC008945.2-201ENST00000606056 604 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 MIR15A-201ENST00000607334 83 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 YWHAEP7-203ENST00000622054 312 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.6□□□□□ -1.99
NDE1Q9NXR1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AC026241.1-201ENST00000517873 2142 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AC000403.1-201ENST00000613696 3585 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 AL137003.2-201ENST00000606924 2538 ntBASIC2.6□□□□□ -1.99
NDE1Q9NXR1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NDE1Q9NXR1 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NDE1Q9NXR1 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NDE1Q9NXR1 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NDE1Q9NXR1 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NDE1Q9NXR1 Y_RNA.89-201ENST00000363031 102 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 Y_RNA.255-201ENST00000364581 97 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 Y_RNA.295-201ENST00000364918 102 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms