Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RN7SKP113-201ENST00000363891 295 ntBASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 RNU1-32P-201ENST00000363937 159 ntBASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 SNORA77-201ENST00000408716 125 ntBASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 RNU2-37P-201ENST00000410695 177 ntBASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 RPL23AP58-201ENST00000440453 469 ntBASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 RNU6-1256P-201ENST00000516539 103 ntBASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 RNA5SP309-201ENST00000516670 106 ntBASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 RNA5SP471-201ENST00000516971 106 ntBASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 KLKP1-201ENST00000595979 403 ntBASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 AC087783.2-201ENST00000605070 562 ntBASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 AC090617.7-201ENST00000623952 126 ntBASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 snoU18.1-201ENST00000629629 71 ntBASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 RNA5SP361-201ENST00000362686 118 ntBASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 RNU6-275P-201ENST00000364910 107 ntBASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 RNU4-17P-201ENST00000365598 141 ntBASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 RNU6-376P-201ENST00000384731 106 ntBASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 MIR513C-201ENST00000401352 84 ntBASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 AL078599.1-201ENST00000402075 293 ntBASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 EBAG9P1-201ENST00000418955 543 ntBASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 DDX39BP1-205ENST00000422507 192 ntBASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 COX6CP13-201ENST00000428703 226 ntBASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 AC011753.3-201ENST00000443436 406 ntBASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 AC009237.7-201ENST00000447357 229 ntBASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 RNU6-1211P-201ENST00000459179 105 ntBASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 RNA5SP103-201ENST00000459503 118 ntBASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 AP000870.1-201ENST00000472927 406 ntBASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 AC004980.4-201ENST00000513375 203 ntBASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 RNU6-1234P-201ENST00000516877 103 ntBASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 RN7SKP260-201ENST00000516907 149 ntBASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 RNU6-844P-201ENST00000517175 102 ntBASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 AC004825.2-201ENST00000616634 455 ntBASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 TUG1_4.1-201ENST00000619464 181 ntBASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 AF117829.1-206ENST00000621883 3802 ntBASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CUEDC1Q9NWM3 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 RN7SKP104-201ENST00000362605 328 ntBASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 RNA5SP123-201ENST00000363244 119 ntBASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 UBBP2-201ENST00000376781 231 ntBASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 RNU6-213P-201ENST00000384051 104 ntBASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 RNU6-968P-201ENST00000384076 107 ntBASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 MIR34A-201ENST00000385130 110 ntBASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 UBA52P6-201ENST00000399822 382 ntBASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 AL357075.1-201ENST00000404107 726 ntBASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 HSPE1P26-201ENST00000405341 275 ntBASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 AC124916.1-201ENST00000444020 547 ntBASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 MIR4691-201ENST00000583764 85 ntBASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 U4.7-201ENST00000638126 106 ntBASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 MARK2P15-201ENST00000432204 2186 ntBASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 AC104623.2-202ENST00000623477 4002 ntBASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms