Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AC011471.1-201ENST00000585766 187 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.89□□□□□ -1.63
ATG3Q9NT62 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.89□□□□□ -1.63
ATG3Q9NT62 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.89□□□□□ -1.63
ATG3Q9NT62 AL359547.2-201ENST00000615810 418 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 AP001282.2-201ENST00000616149 309 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 U73479.1-201ENST00000618062 168 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.89□□□□□ -1.63
ATG3Q9NT62 AC130454.1-201ENST00000622948 401 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 AC127459.3-201ENST00000624328 466 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
ATG3Q9NT62 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.89□□□□□ -1.63
ATG3Q9NT62 HSPA8P4-201ENST00000511877 1920 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.89□□□□□ -1.63
ATG3Q9NT62 AC007390.2-201ENST00000606229 3803 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG3Q9NT62 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.88□□□□□ -1.63
ATG3Q9NT62 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
ATG3Q9NT62 RNU6-1078P-201ENST00000364522 103 ntBASIC4.88□□□□□ -1.63
ATG3Q9NT62 RNA5SP267-201ENST00000364893 126 ntBASIC4.88□□□□□ -1.63
ATG3Q9NT62 RNU6-190P-201ENST00000384154 102 ntBASIC4.88□□□□□ -1.63
ATG3Q9NT62 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
ATG3Q9NT62 AL139039.1-201ENST00000401900 692 ntBASIC4.88□□□□□ -1.63
ATG3Q9NT62 RNA5SP56-201ENST00000410277 118 ntBASIC4.88□□□□□ -1.63
ATG3Q9NT62 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.88□□□□□ -1.63
ATG3Q9NT62 MYL8P-204ENST00000431574 518 ntBASIC4.88□□□□□ -1.63
ATG3Q9NT62 GAPDHP27-201ENST00000447427 1020 ntBASIC4.88□□□□□ -1.63
ATG3Q9NT62 NDUFB1P2-201ENST00000449477 176 ntBASIC4.88□□□□□ -1.63
ATG3Q9NT62 CYCSP35-201ENST00000451978 304 ntBASIC4.88□□□□□ -1.63
ATG3Q9NT62 AC011005.2-201ENST00000487324 359 ntBASIC4.88□□□□□ -1.63
ATG3Q9NT62 AC025554.1-201ENST00000505641 188 ntBASIC4.88□□□□□ -1.63
ATG3Q9NT62 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.88□□□□□ -1.63
ATG3Q9NT62 CYCSP27-201ENST00000527643 293 ntBASIC4.88□□□□□ -1.63
ATG3Q9NT62 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.88□□□□□ -1.63
ATG3Q9NT62 SNORA62.6-201ENST00000606322 83 ntBASIC4.88□□□□□ -1.63
ATG3Q9NT62 AL589994.2-201ENST00000621124 579 ntBASIC4.88□□□□□ -1.63
ATG3Q9NT62 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ATG3Q9NT62 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.88□□□□□ -1.63
ATG3Q9NT62 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ATG3Q9NT62 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.88□□□□□ -1.63
ATG3Q9NT62 GABPAP-201ENST00000419271 1356 ntBASIC4.88□□□□□ -1.63
ATG3Q9NT62 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.87□□□□□ -1.63
ATG3Q9NT62 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.87□□□□□ -1.63
ATG3Q9NT62 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.87□□□□□ -1.63
ATG3Q9NT62 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATG3Q9NT62 XIAPP3-201ENST00000312918 795 ntBASIC4.87□□□□□ -1.63
ATG3Q9NT62 RNU6-214P-201ENST00000384130 107 ntBASIC4.87□□□□□ -1.63
ATG3Q9NT62 AL645568.3-201ENST00000433683 316 ntBASIC4.87□□□□□ -1.63
ATG3Q9NT62 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.87□□□□□ -1.63
ATG3Q9NT62 SNORA71B-202ENST00000439232 272 ntBASIC4.87□□□□□ -1.63
ATG3Q9NT62 RAC1P2-201ENST00000511164 579 ntBASIC4.87□□□□□ -1.63
ATG3Q9NT62 Y_RNA.703-201ENST00000516846 111 ntBASIC4.87□□□□□ -1.63
ATG3Q9NT62 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.87□□□□□ -1.63
ATG3Q9NT62 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.87□□□□□ -1.63
ATG3Q9NT62 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.87□□□□□ -1.63
ATG3Q9NT62 ELOCP5-201ENST00000604924 333 ntBASIC4.87□□□□□ -1.63
ATG3Q9NT62 AL138825.1-201ENST00000618587 192 ntBASIC4.87□□□□□ -1.63
ATG3Q9NT62 AL159153.1-201ENST00000619688 317 ntBASIC4.87□□□□□ -1.63
ATG3Q9NT62 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.87□□□□□ -1.63
ATG3Q9NT62 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.87□□□□□ -1.63
ATG3Q9NT62 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATG3Q9NT62 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATG3Q9NT62 AL359854.1-201ENST00000614203 1594 ntBASIC4.87□□□□□ -1.63
ATG3Q9NT62 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATG3Q9NT62 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATG3Q9NT62 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATG3Q9NT62 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG3Q9NT62 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATG3Q9NT62 RNU6-263P-201ENST00000363811 107 ntBASIC4.86□□□□□ -1.63
ATG3Q9NT62 Y_RNA.464-201ENST00000384282 110 ntBASIC4.86□□□□□ -1.63
ATG3Q9NT62 SNORA51.11-201ENST00000384442 131 ntBASIC4.86□□□□□ -1.63
ATG3Q9NT62 Y_RNA.506-201ENST00000384494 102 ntBASIC4.86□□□□□ -1.63
ATG3Q9NT62 RNU6-293P-201ENST00000411259 106 ntBASIC4.86□□□□□ -1.63
ATG3Q9NT62 AL391219.1-201ENST00000422570 483 ntBASIC4.86□□□□□ -1.63
ATG3Q9NT62 ELOCP18-201ENST00000434209 337 ntBASIC4.86□□□□□ -1.63
ATG3Q9NT62 AC004383.1-201ENST00000438135 289 ntBASIC4.86□□□□□ -1.63
ATG3Q9NT62 RPL23AP31-201ENST00000456160 467 ntBASIC4.86□□□□□ -1.63
ATG3Q9NT62 BX510359.1-201ENST00000456973 237 ntBASIC4.86□□□□□ -1.63
ATG3Q9NT62 RNU7-169P-201ENST00000459456 61 ntBASIC4.86□□□□□ -1.63
ATG3Q9NT62 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG3Q9NT62 DEFB108D-201ENST00000527787 222 ntBASIC4.86□□□□□ -1.63
ATG3Q9NT62 AL355812.1-201ENST00000603215 216 ntBASIC4.86□□□□□ -1.63
ATG3Q9NT62 AC073410.2-201ENST00000603240 332 ntBASIC4.86□□□□□ -1.63
ATG3Q9NT62 AL158032.1-201ENST00000605401 106 ntBASIC4.86□□□□□ -1.63
ATG3Q9NT62 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.86□□□□□ -1.63
ATG3Q9NT62 ZNF962P-201ENST00000443465 3140 ntBASIC4.86□□□□□ -1.63
ATG3Q9NT62 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG3Q9NT62 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
ATG3Q9NT62 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.86□□□□□ -1.63
ATG3Q9NT62 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.86□□□□□ -1.63
ATG3Q9NT62 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATG3Q9NT62 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG3Q9NT62 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG3Q9NT62 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
ATG3Q9NT62 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.85□□□□□ -1.63
ATG3Q9NT62 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG3Q9NT62 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG3Q9NT62 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.85□□□□□ -1.63
ATG3Q9NT62 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
ATG3Q9NT62 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms