Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC092809.3-201ENST00000415453 231 ntBASIC2.5□□□□□ -2.01
HPS4Q9NQG7 CYCSP46-201ENST00000423569 204 ntBASIC2.5□□□□□ -2.01
HPS4Q9NQG7 AL139415.2-201ENST00000431968 163 ntBASIC2.5□□□□□ -2.01
HPS4Q9NQG7 USP9YP15-201ENST00000442391 422 ntBASIC2.5□□□□□ -2.01
HPS4Q9NQG7 BRK1P2-201ENST00000442875 223 ntBASIC2.5□□□□□ -2.01
HPS4Q9NQG7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.5□□□□□ -2.01
HPS4Q9NQG7 OSTCP8-201ENST00000445117 448 ntBASIC2.5□□□□□ -2.01
HPS4Q9NQG7 snoU13.15-201ENST00000459407 104 ntBASIC2.5□□□□□ -2.01
HPS4Q9NQG7 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.5□□□□□ -2.01
HPS4Q9NQG7 EIF4EP3-201ENST00000498782 656 ntBASIC2.5□□□□□ -2.01
HPS4Q9NQG7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.5□□□□□ -2.01
HPS4Q9NQG7 RNU5F-8P-201ENST00000515941 111 ntBASIC2.5□□□□□ -2.01
HPS4Q9NQG7 Y_RNA.672-201ENST00000516289 104 ntBASIC2.5□□□□□ -2.01
HPS4Q9NQG7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.5□□□□□ -2.01
HPS4Q9NQG7 AC021269.2-201ENST00000532318 330 ntBASIC2.5□□□□□ -2.01
HPS4Q9NQG7 AP000873.5-201ENST00000533906 236 ntBASIC2.5□□□□□ -2.01
HPS4Q9NQG7 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.5□□□□□ -2.01
HPS4Q9NQG7 AP005136.1-201ENST00000579765 429 ntBASIC2.5□□□□□ -2.01
HPS4Q9NQG7 AC024619.4-201ENST00000580924 316 ntBASIC2.5□□□□□ -2.01
HPS4Q9NQG7 AC010620.1-201ENST00000601088 1102 ntBASIC2.5□□□□□ -2.01
HPS4Q9NQG7 AC073544.2-201ENST00000601155 540 ntBASIC2.5□□□□□ -2.01
HPS4Q9NQG7 AL589743.7-201ENST00000612637 233 ntBASIC2.5□□□□□ -2.01
HPS4Q9NQG7 AL512643.1-201ENST00000635735 524 ntBASIC2.5□□□□□ -2.01
HPS4Q9NQG7 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HPS4Q9NQG7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.5□□□□□ -2.01
HPS4Q9NQG7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HPS4Q9NQG7 AC069528.2-201ENST00000624849 1991 ntBASIC2.49□□□□□ -2.01
HPS4Q9NQG7 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.49□□□□□ -2.01
HPS4Q9NQG7 SNORA4.3-201ENST00000365564 137 ntBASIC2.49□□□□□ -2.01
HPS4Q9NQG7 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.49□□□□□ -2.01
HPS4Q9NQG7 RPS12P2-201ENST00000439728 269 ntBASIC2.49□□□□□ -2.01
HPS4Q9NQG7 PGBD4P3-201ENST00000440731 581 ntBASIC2.49□□□□□ -2.01
HPS4Q9NQG7 Z83846.1-201ENST00000446798 265 ntBASIC2.49□□□□□ -2.01
HPS4Q9NQG7 AL139109.1-201ENST00000455491 297 ntBASIC2.49□□□□□ -2.01
HPS4Q9NQG7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.49□□□□□ -2.01
HPS4Q9NQG7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.49□□□□□ -2.01
HPS4Q9NQG7 AC007182.2-201ENST00000489251 402 ntBASIC2.49□□□□□ -2.01
HPS4Q9NQG7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.49□□□□□ -2.01
HPS4Q9NQG7 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.49□□□□□ -2.01
HPS4Q9NQG7 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.49□□□□□ -2.01
HPS4Q9NQG7 RNU6-914P-201ENST00000516749 109 ntBASIC2.49□□□□□ -2.01
HPS4Q9NQG7 AC009902.1-201ENST00000519351 183 ntBASIC2.49□□□□□ -2.01
HPS4Q9NQG7 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.49□□□□□ -2.01
HPS4Q9NQG7 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
HPS4Q9NQG7 AC006199.1-201ENST00000548728 219 ntBASIC2.49□□□□□ -2.01
HPS4Q9NQG7 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.49□□□□□ -2.01
HPS4Q9NQG7 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.49□□□□□ -2.01
HPS4Q9NQG7 AC012414.6-201ENST00000568241 401 ntBASIC2.49□□□□□ -2.01
HPS4Q9NQG7 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.49□□□□□ -2.01
HPS4Q9NQG7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.49□□□□□ -2.01
HPS4Q9NQG7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.49□□□□□ -2.01
HPS4Q9NQG7 AL391813.1-201ENST00000603098 260 ntBASIC2.49□□□□□ -2.01
HPS4Q9NQG7 Z94722.1-201ENST00000604328 474 ntBASIC2.49□□□□□ -2.01
HPS4Q9NQG7 AC091304.9-201ENST00000612091 226 ntBASIC2.49□□□□□ -2.01
HPS4Q9NQG7 HMGB1P24-202ENST00000615653 685 ntBASIC2.49□□□□□ -2.01
HPS4Q9NQG7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.49□□□□□ -2.01
HPS4Q9NQG7 U6.99-201ENST00000637524 83 ntBASIC2.49□□□□□ -2.01
HPS4Q9NQG7 AC016717.2-201ENST00000609089 5141 ntBASIC2.49□□□□□ -2.01
HPS4Q9NQG7 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.48□□□□□ -2.01
HPS4Q9NQG7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
HPS4Q9NQG7 AL139276.1-201ENST00000311910 1001 ntBASIC2.48□□□□□ -2.01
HPS4Q9NQG7 AC073343.1-201ENST00000328239 651 ntBASIC2.48□□□□□ -2.01
HPS4Q9NQG7 SNORA38-201ENST00000363946 132 ntBASIC2.48□□□□□ -2.01
HPS4Q9NQG7 RNU6-39P-201ENST00000384344 107 ntBASIC2.48□□□□□ -2.01
HPS4Q9NQG7 MIR301A-201ENST00000385261 86 ntBASIC2.48□□□□□ -2.01
HPS4Q9NQG7 RPL23AP32-201ENST00000395315 459 ntBASIC2.48□□□□□ -2.01
HPS4Q9NQG7 AL135786.1-201ENST00000415892 214 ntBASIC2.48□□□□□ -2.01
HPS4Q9NQG7 ELOCP4-201ENST00000420090 333 ntBASIC2.48□□□□□ -2.01
HPS4Q9NQG7 BX276092.3-201ENST00000424182 230 ntBASIC2.48□□□□□ -2.01
HPS4Q9NQG7 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HPS4Q9NQG7 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.48□□□□□ -2.01
HPS4Q9NQG7 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.48□□□□□ -2.01
HPS4Q9NQG7 AL591704.1-201ENST00000432574 275 ntBASIC2.48□□□□□ -2.01
HPS4Q9NQG7 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.48□□□□□ -2.01
HPS4Q9NQG7 CR769767.1-201ENST00000436337 346 ntBASIC2.48□□□□□ -2.01
HPS4Q9NQG7 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.48□□□□□ -2.01
HPS4Q9NQG7 FDX1P2-201ENST00000450769 375 ntBASIC2.48□□□□□ -2.01
HPS4Q9NQG7 RNU7-26P-201ENST00000458980 63 ntBASIC2.48□□□□□ -2.01
HPS4Q9NQG7 AC073901.1-201ENST00000462471 408 ntBASIC2.48□□□□□ -2.01
HPS4Q9NQG7 AC133134.1-201ENST00000466800 359 ntBASIC2.48□□□□□ -2.01
HPS4Q9NQG7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.48□□□□□ -2.01
HPS4Q9NQG7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.48□□□□□ -2.01
HPS4Q9NQG7 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.48□□□□□ -2.01
HPS4Q9NQG7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.48□□□□□ -2.01
HPS4Q9NQG7 AC117522.2-201ENST00000510049 657 ntBASIC2.48□□□□□ -2.01
HPS4Q9NQG7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.48□□□□□ -2.01
HPS4Q9NQG7 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.48□□□□□ -2.01
HPS4Q9NQG7 AC022447.1-201ENST00000515358 464 ntBASIC2.48□□□□□ -2.01
HPS4Q9NQG7 RNA5SP281-201ENST00000516504 135 ntBASIC2.48□□□□□ -2.01
HPS4Q9NQG7 Y_RNA.689-201ENST00000516589 107 ntBASIC2.48□□□□□ -2.01
HPS4Q9NQG7 RNU6-1183P-201ENST00000517054 60 ntBASIC2.48□□□□□ -2.01
HPS4Q9NQG7 AC025755.1-201ENST00000521306 278 ntBASIC2.48□□□□□ -2.01
HPS4Q9NQG7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.48□□□□□ -2.01
HPS4Q9NQG7 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.48□□□□□ -2.01
HPS4Q9NQG7 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.48□□□□□ -2.01
HPS4Q9NQG7 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.48□□□□□ -2.01
HPS4Q9NQG7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HPS4Q9NQG7 MIR4648-201ENST00000580107 72 ntBASIC2.48□□□□□ -2.01
HPS4Q9NQG7 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.48□□□□□ -2.01
HPS4Q9NQG7 MIR4658-201ENST00000584344 65 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms