Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 RNA5SP37-201ENST00000365420 130 ntBASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 SNORA67.3-201ENST00000384366 140 ntBASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 RNU6-809P-201ENST00000384461 107 ntBASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 AC005094.1-201ENST00000440420 368 ntBASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 AC092001.1-201ENST00000453012 261 ntBASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 RNA5SP233-201ENST00000459153 113 ntBASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 AC068587.2-201ENST00000478386 781 ntBASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 AC018437.1-201ENST00000492214 406 ntBASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 SMURF2P1-201ENST00000514992 481 ntBASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 MTATP6P15-201ENST00000527233 835 ntBASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 MIR4287-201ENST00000579398 78 ntBASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 AC068790.3-201ENST00000602988 553 ntBASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 AC025811.1-201ENST00000604312 472 ntBASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 AC093424.1-201ENST00000604999 338 ntBASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 Y_RNA.46-201ENST00000362695 102 ntBASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 RNU6-1284P-201ENST00000363701 100 ntBASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 RPS20P2-201ENST00000402520 389 ntBASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 GSTA9P-201ENST00000406231 611 ntBASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 EDDM3CP-201ENST00000415977 425 ntBASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 RPS15AP9-201ENST00000439856 381 ntBASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 AC117503.1-201ENST00000472241 394 ntBASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 MTND2P14-201ENST00000482139 351 ntBASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 RPF2P2-201ENST00000504693 896 ntBASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 AF131216.2-201ENST00000512316 564 ntBASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 RNU6-581P-201ENST00000516214 105 ntBASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 RN7SKP287-201ENST00000516546 266 ntBASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 AC123904.2-201ENST00000548059 300 ntBASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 ZNF321P-202ENST00000550843 495 ntBASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 MIR4782-201ENST00000577987 79 ntBASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 MIR4293-201ENST00000584305 78 ntBASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 AC034229.4-201ENST00000607861 441 ntBASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 AL162373.1-201ENST00000620433 407 ntBASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 MIR219B-201ENST00000637023 88 ntBASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 AC092881.1-201ENST00000638218 2733 ntBASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TM9SF3Q9HD45 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 RNU6-1280P-201ENST00000365211 107 ntBASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 SNORA51.11-201ENST00000384442 131 ntBASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 RNU6-482P-201ENST00000391068 107 ntBASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 AL023284.1-201ENST00000403956 276 ntBASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 MTCYBP36-201ENST00000404146 440 ntBASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 AL356379.1-201ENST00000414105 126 ntBASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 ZNF90P2-204ENST00000419323 1075 ntBASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 AL008629.1-201ENST00000438615 184 ntBASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 MTND5P2-201ENST00000442927 1142 ntBASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 RNU6-1183P-201ENST00000517054 60 ntBASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 AC068587.4-201ENST00000533893 186 ntBASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 AC009094.1-201ENST00000564443 426 ntBASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 AC012213.3-201ENST00000577199 777 ntBASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 AC008751.2-201ENST00000597885 980 ntBASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 AC105129.3-201ENST00000605455 485 ntBASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 AC023510.2-201ENST00000622162 746 ntBASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 AC091965.5-201ENST00000624785 342 ntBASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
TM9SF3Q9HD45 AL359851.1-201ENST00000569460 4997 ntBASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 SNORA46.1-201ENST00000391069 153 ntBASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 HMGB3P2-201ENST00000411913 584 ntBASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 AL160275.3-201ENST00000423876 471 ntBASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 RPL7P34-201ENST00000433316 712 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms