Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AC009093.8-201ENST00000641769 292 ntBASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 ZNF519P1-201ENST00000449011 1626 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 AC027514.1-201ENST00000588561 1603 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 RNU1-70P-201ENST00000362618 164 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 RNY4P14-201ENST00000363656 96 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 RNA5SP515-201ENST00000364570 118 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 RNU6-1280P-201ENST00000365211 107 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 RNU4-12P-201ENST00000365233 139 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 Y_RNA.399-201ENST00000383955 105 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 Y_RNA.450-201ENST00000384198 113 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 MIR554-201ENST00000384874 96 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 AL512633.1-201ENST00000399931 655 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 AL357075.1-201ENST00000404107 726 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 U3.37-201ENST00000408528 213 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 Y_RNA.619-201ENST00000410951 90 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 RPS29P4-201ENST00000414733 161 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 BX682237.1-201ENST00000415016 335 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 MTCO1P20-201ENST00000425366 358 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 AL159987.2-201ENST00000432754 307 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 RPS27AP9-201ENST00000477681 438 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 RNU4-29P-201ENST00000515943 174 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 Y_RNA.687-201ENST00000516558 91 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 RNU1-45P-201ENST00000517191 141 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 AL118558.2-201ENST00000556294 238 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 AC106782.4-201ENST00000568264 210 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 AC119501.1-201ENST00000603646 475 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 FER-210ENST00000628534 558 ntTSL 5 BASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.72□□□□□ -1.97
CHMP1AQ9HD42 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
CHMP1AQ9HD42 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 Y_RNA.9-201ENST00000362354 101 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 RNU6-942P-201ENST00000363002 107 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 RNA5SP50-201ENST00000363731 107 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 MIR34A-201ENST00000385130 110 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 SNORD37.1-201ENST00000390968 65 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 SNORA57.1-201ENST00000391227 145 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 FTH1P15-201ENST00000406984 280 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 MIR1193-201ENST00000408109 78 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 USP9YP27-201ENST00000418455 438 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 USP9YP18-201ENST00000425912 695 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 SEPT14P3-201ENST00000439401 183 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 CALM1P1-201ENST00000442082 433 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 AL732372.2-207ENST00000445840 183 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 SEPT14P2-201ENST00000453405 183 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 AC008571.1-201ENST00000467232 300 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 MTCO3P38-201ENST00000468910 766 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 AL121769.1-201ENST00000469473 401 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 RPL23AP11-201ENST00000475260 469 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 SEPT14P4-201ENST00000513445 186 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 SNORA31.6-201ENST00000516241 130 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 RNU6-1038P-201ENST00000516516 104 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 ACA59.2-201ENST00000517061 156 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 FO082796.1-201ENST00000523795 183 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 AC109635.3-201ENST00000529536 185 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 MIR4697-201ENST00000582977 78 ntBASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CHMP1AQ9HD42 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 AC004944.1-201ENST00000517807 3059 ntBASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 RNA5SP124-201ENST00000362739 110 ntBASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 RNU6-451P-201ENST00000362921 107 ntBASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 Y_RNA.324-201ENST00000365165 102 ntBASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 Y_RNA.402-201ENST00000383972 102 ntBASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 RNU6-19P-201ENST00000384718 107 ntBASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 MIR514A2-201ENST00000385131 88 ntBASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 MIR514A3-201ENST00000385132 88 ntBASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 PTGES3P4-201ENST00000426243 356 ntBASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 SAR1AP4-201ENST00000429225 591 ntBASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 UBE2V1P8-201ENST00000437166 265 ntBASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms