Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC022018.1-201ENST00000430685 241 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 AL606489.2-201ENST00000433886 234 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 HMGN2P10-201ENST00000448085 265 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 AC073415.1-201ENST00000449240 153 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 FDX1P2-201ENST00000450769 375 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 AL118520.1-201ENST00000450770 291 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 HMGB1P30-201ENST00000492455 606 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 AC022493.1-201ENST00000492984 337 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 AC092436.1-201ENST00000506450 503 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 AC016957.1-201ENST00000534895 309 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 HMGB1P33-201ENST00000563485 527 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 AC010653.1-201ENST00000571108 881 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 MTATP6P3-201ENST00000581686 676 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 AC068790.6-201ENST00000602558 258 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 AC007621.1-201ENST00000604544 437 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 AC013562.2-201ENST00000611632 603 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 MIR3199-2-201ENST00000636243 86 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 AP003122.5-201ENST00000527668 3766 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 FAM35CP-201ENST00000554755 2470 ntBASIC3□□□□□ -1.93
POLR1BQ9H9Y6 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3□□□□□ -1.93
POLR1BQ9H9Y6 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3□□□□□ -1.93
POLR1BQ9H9Y6 HSPA8P4-201ENST00000511877 1920 ntBASIC3□□□□□ -1.93
POLR1BQ9H9Y6 IARS-201ENST00000375627 697 ntTSL 3 BASIC3□□□□□ -1.93
POLR1BQ9H9Y6 RNU6-903P-201ENST00000391270 109 ntBASIC3□□□□□ -1.93
POLR1BQ9H9Y6 AC068050.1-201ENST00000394891 380 ntBASIC3□□□□□ -1.93
POLR1BQ9H9Y6 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3□□□□□ -1.93
POLR1BQ9H9Y6 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3□□□□□ -1.93
POLR1BQ9H9Y6 AL627311.1-201ENST00000431514 115 ntBASIC3□□□□□ -1.93
POLR1BQ9H9Y6 RPL7P54-201ENST00000438336 674 ntBASIC3□□□□□ -1.93
POLR1BQ9H9Y6 RPL23AP58-201ENST00000440453 469 ntBASIC3□□□□□ -1.93
POLR1BQ9H9Y6 AC016691.1-201ENST00000441321 413 ntBASIC3□□□□□ -1.93
POLR1BQ9H9Y6 SNRPFP3-201ENST00000457792 225 ntBASIC3□□□□□ -1.93
POLR1BQ9H9Y6 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3□□□□□ -1.93
POLR1BQ9H9Y6 RPS27P26-201ENST00000494583 239 ntBASIC3□□□□□ -1.93
POLR1BQ9H9Y6 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3□□□□□ -1.93
POLR1BQ9H9Y6 AC079140.5-201ENST00000507882 310 ntBASIC3□□□□□ -1.93
POLR1BQ9H9Y6 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3□□□□□ -1.93
POLR1BQ9H9Y6 AC112206.3-201ENST00000514578 389 ntBASIC3□□□□□ -1.93
POLR1BQ9H9Y6 RNA5SP356-201ENST00000515972 94 ntBASIC3□□□□□ -1.93
POLR1BQ9H9Y6 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3□□□□□ -1.93
POLR1BQ9H9Y6 SNORD19.2-201ENST00000516978 73 ntBASIC3□□□□□ -1.93
POLR1BQ9H9Y6 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3□□□□□ -1.93
POLR1BQ9H9Y6 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3□□□□□ -1.93
POLR1BQ9H9Y6 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3□□□□□ -1.93
POLR1BQ9H9Y6 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3□□□□□ -1.93
POLR1BQ9H9Y6 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3□□□□□ -1.93
POLR1BQ9H9Y6 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3□□□□□ -1.93
POLR1BQ9H9Y6 AL512360.1-201ENST00000555346 234 ntBASIC3□□□□□ -1.93
POLR1BQ9H9Y6 AC021739.1-201ENST00000559631 174 ntBASIC3□□□□□ -1.93
POLR1BQ9H9Y6 LINC00933-203ENST00000559812 219 ntBASIC3□□□□□ -1.93
POLR1BQ9H9Y6 AC234778.2-201ENST00000566241 354 ntBASIC3□□□□□ -1.93
POLR1BQ9H9Y6 MIR3162-201ENST00000581818 82 ntBASIC3□□□□□ -1.93
POLR1BQ9H9Y6 AC080078.2-201ENST00000603766 501 ntBASIC3□□□□□ -1.93
POLR1BQ9H9Y6 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3□□□□□ -1.93
POLR1BQ9H9Y6 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3□□□□□ -1.93
POLR1BQ9H9Y6 AL354950.2-201ENST00000617939 290 ntBASIC3□□□□□ -1.93
POLR1BQ9H9Y6 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3□□□□□ -1.93
POLR1BQ9H9Y6 ZNF519P1-201ENST00000449011 1626 ntBASIC3□□□□□ -1.93
POLR1BQ9H9Y6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
POLR1BQ9H9Y6 ASNSP3-201ENST00000451989 1306 ntBASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 RNU6-552P-201ENST00000362869 119 ntBASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 RNU6-166P-201ENST00000384371 107 ntBASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 AL591416.1-201ENST00000404015 867 ntBASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 Y_RNA.623-201ENST00000411128 95 ntBASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 AC023141.4-201ENST00000412031 328 ntBASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 EEF1A1P41-201ENST00000414667 207 ntBASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 AL645937.1-202ENST00000421799 937 ntBASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 AC007560.1-201ENST00000426912 237 ntBASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 GTF2IP20-201ENST00000431663 360 ntBASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 RNU6-314P-201ENST00000516574 104 ntBASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 RN7SKP272-201ENST00000516988 232 ntBASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 SNORA31.26-201ENST00000517250 137 ntBASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 AL157687.1-201ENST00000554853 619 ntBASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 GTF3AP2-201ENST00000557014 266 ntBASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 CYCSP39-201ENST00000565821 309 ntBASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 AC025678.1-201ENST00000567861 338 ntBASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 MIR3941-201ENST00000582572 103 ntBASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 ELOCP29-201ENST00000588193 334 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms