Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
BCAS3Q9H6U6 SDAD1P2-201ENST00000441308 2028 ntBASIC4.16□□□□□ -1.74
BCAS3Q9H6U6 AC073073.2-201ENST00000609827 2578 ntBASIC4.15□□□□□ -1.74
BCAS3Q9H6U6 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
BCAS3Q9H6U6 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
BCAS3Q9H6U6 AC233263.6-201ENST00000631132 1963 ntBASIC4.15□□□□□ -1.74
BCAS3Q9H6U6 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
BCAS3Q9H6U6 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 Y_RNA.350-201ENST00000365409 98 ntBASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 Y_RNA.526-201ENST00000384572 110 ntBASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 Y_RNA.551-201ENST00000384661 102 ntBASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 Y_RNA.562-201ENST00000384695 113 ntBASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 RNU6-1156P-201ENST00000410365 100 ntBASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 ATP5A1P2-201ENST00000412323 255 ntBASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 BX276092.3-201ENST00000424182 230 ntBASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 AC139712.2-201ENST00000424302 339 ntBASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 MTATP6P4-201ENST00000427725 675 ntBASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 HMGB1P27-201ENST00000431429 603 ntBASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 DYNLT3P2-201ENST00000442517 295 ntBASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 AC069499.1-201ENST00000489433 509 ntBASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 MTND3P25-201ENST00000509243 135 ntBASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 RNU6-1143P-201ENST00000516125 104 ntBASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 RNA5SP164-201ENST00000516533 110 ntBASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 RNU7-4P-201ENST00000516961 62 ntBASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 AC040926.1-201ENST00000530195 238 ntBASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 HMGB3P26-201ENST00000560051 582 ntBASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 AC125232.2-201ENST00000592457 143 ntBASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 U73479.1-201ENST00000618062 168 ntBASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
BCAS3Q9H6U6 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 AC009812.4-201ENST00000569134 1805 ntBASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 RNA5SP72-201ENST00000364442 117 ntBASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 Y_RNA.314-201ENST00000365114 102 ntBASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 MIR708-201ENST00000390708 88 ntBASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 RNA5SP104-201ENST00000410989 118 ntBASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 AL138785.1-201ENST00000425821 331 ntBASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 RPL21P2-201ENST00000440049 481 ntBASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 RPS3AP46-201ENST00000448352 682 ntBASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 SNORD127-201ENST00000458892 86 ntBASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 RNU6-1132P-201ENST00000459214 107 ntBASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 AC114801.2-201ENST00000503825 781 ntBASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 AC105758.1-201ENST00000506038 399 ntBASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 APOOP4-201ENST00000513530 597 ntBASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 AC107918.3-201ENST00000533272 382 ntBASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 MIR4298-201ENST00000584380 73 ntBASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 OR1M4P-201ENST00000589199 287 ntBASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 AC015967.1-201ENST00000619893 476 ntBASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.14□□□□□ -1.75
BCAS3Q9H6U6 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 Y_RNA.111-201ENST00000363248 100 ntBASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 Y_RNA.214-201ENST00000364201 112 ntBASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 RNU6-713P-201ENST00000384761 107 ntBASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 RNA5SP424-201ENST00000390988 115 ntBASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 AL159987.2-201ENST00000432754 307 ntBASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 CEACAMP4-201ENST00000457676 421 ntBASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 BTF3L4P4-201ENST00000506381 449 ntBASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 AC110768.1-201ENST00000509222 400 ntBASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 NDUFB4P9-201ENST00000511646 388 ntBASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 RN7SKP18-201ENST00000516005 275 ntBASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 AC126177.3-201ENST00000551839 688 ntBASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 VN1R91P-201ENST00000594377 169 ntBASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 AC078938.1-201ENST00000620993 318 ntBASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms