Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC010378.1-201ENST00000619270 362 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 AL589994.2-201ENST00000621124 579 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 FRG1KP-201ENST00000623592 341 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 AC110994.2-201ENST00000635481 492 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RNF41Q9H4P4 AC138915.1-201ENST00000565427 1685 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
RNF41Q9H4P4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
RNF41Q9H4P4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.49□□□□□ -2.01
RNF41Q9H4P4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
RNF41Q9H4P4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RNF41Q9H4P4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.48□□□□□ -2.01
RNF41Q9H4P4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RNF41Q9H4P4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.48□□□□□ -2.01
RNF41Q9H4P4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RNF41Q9H4P4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.48□□□□□ -2.01
RNF41Q9H4P4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RNF41Q9H4P4 Y_RNA.51-201ENST00000362725 102 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 RNU6-778P-201ENST00000363269 103 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 RNU6-288P-201ENST00000363690 104 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.48□□□□□ -2.01
RNF41Q9H4P4 SNORA20.2-201ENST00000383922 131 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 MIR888-201ENST00000401186 77 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 AC023141.4-201ENST00000412031 328 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.48□□□□□ -2.01
RNF41Q9H4P4 AL513477.1-202ENST00000417061 214 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 ELOCP4-201ENST00000420090 333 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.48□□□□□ -2.01
RNF41Q9H4P4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.48□□□□□ -2.01
RNF41Q9H4P4 AC073614.1-201ENST00000438690 650 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 WASF1P1-201ENST00000447560 1131 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 MTCO2P18-201ENST00000457151 658 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 MRPS17P3-201ENST00000465453 385 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.48□□□□□ -2.01
RNF41Q9H4P4 RN7SL429P-201ENST00000479090 223 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 RN7SL489P-201ENST00000486185 223 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 RN7SL327P-201ENST00000488659 223 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 AC105252.1-201ENST00000503089 286 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 RPL37P25-201ENST00000507308 276 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 RNU1-41P-201ENST00000516161 162 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 RNU1-48P-201ENST00000516400 162 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.48□□□□□ -2.01
RNF41Q9H4P4 AP000873.5-201ENST00000533906 236 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.48□□□□□ -2.01
RNF41Q9H4P4 AC087883.1-201ENST00000551882 391 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.48□□□□□ -2.01
RNF41Q9H4P4 AC006362.1-201ENST00000567392 174 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 AC137800.2-201ENST00000574375 120 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 MIR3945-201ENST00000581853 98 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.48□□□□□ -2.01
RNF41Q9H4P4 AC174048.1-201ENST00000603389 144 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 AC080013.6-201ENST00000606185 215 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 AC245008.1-201ENST00000608123 476 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 AC010678.1-201ENST00000614118 713 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 AC009090.3-201ENST00000616553 565 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
RNF41Q9H4P4 RN7SL853P-201ENST00000617250 223 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 AC090582.1-201ENST00000636321 199 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 AC099654.7-201ENST00000635788 2127 ntBASIC2.48□□□□□ -2.01
RNF41Q9H4P4 DEFB108C-201ENST00000400154 252 ntBASIC2.47□□□□□ -2.01
RNF41Q9H4P4 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.47□□□□□ -2.01
RNF41Q9H4P4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.47□□□□□ -2.01
RNF41Q9H4P4 CDK8P2-201ENST00000415020 547 ntBASIC2.47□□□□□ -2.01
RNF41Q9H4P4 AC092809.3-201ENST00000415453 231 ntBASIC2.47□□□□□ -2.01
RNF41Q9H4P4 BX295541.1-201ENST00000417774 250 ntBASIC2.47□□□□□ -2.01
RNF41Q9H4P4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.47□□□□□ -2.01
RNF41Q9H4P4 MTCO2P34-201ENST00000421994 607 ntBASIC2.47□□□□□ -2.01
RNF41Q9H4P4 MED13P1-201ENST00000428342 171 ntBASIC2.47□□□□□ -2.01
RNF41Q9H4P4 RPL31P35-201ENST00000431058 377 ntBASIC2.47□□□□□ -2.01
RNF41Q9H4P4 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.47□□□□□ -2.01
RNF41Q9H4P4 AL136380.1-201ENST00000447970 162 ntBASIC2.47□□□□□ -2.01
RNF41Q9H4P4 AC139453.3-201ENST00000493276 369 ntBASIC2.47□□□□□ -2.01
RNF41Q9H4P4 RPS29P21-201ENST00000496272 170 ntBASIC2.47□□□□□ -2.01
RNF41Q9H4P4 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.47□□□□□ -2.01
RNF41Q9H4P4 SUMO2P6-201ENST00000505273 288 ntBASIC2.47□□□□□ -2.01
RNF41Q9H4P4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.47□□□□□ -2.01
RNF41Q9H4P4 RNU6-703P-201ENST00000516946 107 ntBASIC2.47□□□□□ -2.01
RNF41Q9H4P4 RNA5SP165-201ENST00000517142 115 ntBASIC2.47□□□□□ -2.01
RNF41Q9H4P4 HSPE1P18-201ENST00000517602 280 ntBASIC2.47□□□□□ -2.01
RNF41Q9H4P4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.47□□□□□ -2.01
RNF41Q9H4P4 AP002453.2-201ENST00000533503 320 ntBASIC2.47□□□□□ -2.01
RNF41Q9H4P4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.47□□□□□ -2.01
RNF41Q9H4P4 HMGN2P15-201ENST00000585707 270 ntBASIC2.47□□□□□ -2.01
RNF41Q9H4P4 NRBF2P1-201ENST00000587407 859 ntBASIC2.47□□□□□ -2.01
RNF41Q9H4P4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.47□□□□□ -2.01
RNF41Q9H4P4 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.47□□□□□ -2.01
RNF41Q9H4P4 AC098614.4-201ENST00000607601 462 ntBASIC2.47□□□□□ -2.01
RNF41Q9H4P4 AC097065.2-201ENST00000608159 533 ntBASIC2.47□□□□□ -2.01
RNF41Q9H4P4 AC004908.3-201ENST00000610248 625 ntBASIC2.47□□□□□ -2.01
RNF41Q9H4P4 AL161629.2-201ENST00000615347 275 ntBASIC2.47□□□□□ -2.01
RNF41Q9H4P4 AC099842.1-201ENST00000619919 596 ntBASIC2.47□□□□□ -2.01
RNF41Q9H4P4 AC073308.1-201ENST00000623696 305 ntBASIC2.47□□□□□ -2.01
RNF41Q9H4P4 AC005336.3-201ENST00000623833 2679 ntBASIC2.47□□□□□ -2.01
RNF41Q9H4P4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
RNF41Q9H4P4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
RNF41Q9H4P4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.01
RNF41Q9H4P4 ZNF720P1-201ENST00000562403 1939 ntBASIC2.46□□□□□ -2.02
RNF41Q9H4P4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.46□□□□□ -2.02
RNF41Q9H4P4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
RNF41Q9H4P4 AC073343.1-201ENST00000328239 651 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms