Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 RNU6-190P-201ENST00000384154 102 ntBASIC3.26□□□□□ -1.89
CDT1Q9H211 RNU6-373P-201ENST00000411247 98 ntBASIC3.26□□□□□ -1.89
CDT1Q9H211 RPS12P24-201ENST00000412619 387 ntBASIC3.26□□□□□ -1.89
CDT1Q9H211 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.26□□□□□ -1.89
CDT1Q9H211 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.26□□□□□ -1.89
CDT1Q9H211 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.26□□□□□ -1.89
CDT1Q9H211 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.26□□□□□ -1.89
CDT1Q9H211 RPL38P4-201ENST00000502376 214 ntBASIC3.26□□□□□ -1.89
CDT1Q9H211 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.26□□□□□ -1.89
CDT1Q9H211 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.26□□□□□ -1.89
CDT1Q9H211 RNU6-677P-201ENST00000516914 101 ntBASIC3.26□□□□□ -1.89
CDT1Q9H211 RNA5SP471-201ENST00000516971 106 ntBASIC3.26□□□□□ -1.89
CDT1Q9H211 RNU6-1314P-201ENST00000517139 104 ntBASIC3.26□□□□□ -1.89
CDT1Q9H211 RNU6-1231P-201ENST00000517185 103 ntBASIC3.26□□□□□ -1.89
CDT1Q9H211 IGHV3-76-201ENST00000522465 295 ntBASIC3.26□□□□□ -1.89
CDT1Q9H211 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.26□□□□□ -1.89
CDT1Q9H211 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.26□□□□□ -1.89
CDT1Q9H211 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.26□□□□□ -1.89
CDT1Q9H211 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.26□□□□□ -1.89
CDT1Q9H211 MIR4424-201ENST00000585257 86 ntBASIC3.26□□□□□ -1.89
CDT1Q9H211 AC174048.1-201ENST00000603389 144 ntBASIC3.26□□□□□ -1.89
CDT1Q9H211 AC034102.8-201ENST00000615146 484 ntBASIC3.26□□□□□ -1.89
CDT1Q9H211 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.26□□□□□ -1.89
CDT1Q9H211 AC118273.1-201ENST00000525324 3006 ntBASIC3.26□□□□□ -1.89
CDT1Q9H211 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDT1Q9H211 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDT1Q9H211 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDT1Q9H211 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDT1Q9H211 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.26□□□□□ -1.89
CDT1Q9H211 MTND4P23-201ENST00000447723 1363 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDT1Q9H211 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
CDT1Q9H211 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.25□□□□□ -1.89
CDT1Q9H211 UBE2L2-201ENST00000254302 429 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 RNU6-552P-201ENST00000362869 119 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 RNU6-1287P-201ENST00000362914 107 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 U3.6-201ENST00000363622 211 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 RNU6-1060P-201ENST00000384664 107 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 MIR514A2-201ENST00000385131 88 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 MIR514A3-201ENST00000385132 88 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 RNU6-817P-201ENST00000391083 104 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.25□□□□□ -1.89
CDT1Q9H211 MTCO3P46-201ENST00000425787 232 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 AC007919.1-201ENST00000429380 217 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 AL139132.1-201ENST00000431587 344 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 AL591212.2-201ENST00000433923 257 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 RPL7P12-201ENST00000446719 750 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 RPL37P4-201ENST00000448908 268 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.25□□□□□ -1.89
CDT1Q9H211 RNU6-953P-201ENST00000459154 107 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 AC087588.1-201ENST00000462203 316 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 MTCO3P9-201ENST00000506989 781 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 CCDC34P1-201ENST00000507441 517 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 AC098591.2-201ENST00000510152 315 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 EIF4BP1-201ENST00000554881 351 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.25□□□□□ -1.89
CDT1Q9H211 AC026464.5-201ENST00000562497 722 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 MIR4742-201ENST00000581069 85 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 AL670379.4-201ENST00000605279 254 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 CTHRC1P1-201ENST00000605383 469 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.25□□□□□ -1.89
CDT1Q9H211 AC022893.3-201ENST00000607665 437 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.25□□□□□ -1.89
CDT1Q9H211 AC092628.2-201ENST00000622492 339 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.25□□□□□ -1.89
CDT1Q9H211 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CDT1Q9H211 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDT1Q9H211 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDT1Q9H211 AC103710.2-202ENST00000641454 2853 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 MTND4P14-201ENST00000435799 1354 ntBASIC3.25□□□□□ -1.89
CDT1Q9H211 AL139276.1-201ENST00000311910 1001 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 Y_RNA.67-201ENST00000362870 100 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 Y_RNA.166-201ENST00000363730 102 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 Y_RNA.167-201ENST00000363735 109 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 RNU6-512P-201ENST00000364438 103 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 RNU6-522P-201ENST00000364497 107 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 XGY1-201ENST00000381172 446 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 RPL5P18-201ENST00000406671 891 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 RNU6-387P-201ENST00000411331 105 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 RPL7P46-201ENST00000425129 740 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.24□□□□□ -1.89
CDT1Q9H211 AC236972.1-201ENST00000433225 199 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.24□□□□□ -1.89
CDT1Q9H211 IFNA20P-201ENST00000436840 528 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 RPL23AP22-201ENST00000437556 453 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 AC009237.8-201ENST00000445492 379 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 AL118496.2-201ENST00000448300 230 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.24□□□□□ -1.89
CDT1Q9H211 AC233279.1-201ENST00000455300 423 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 RNU7-180P-201ENST00000459240 63 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 RNU6-329P-201ENST00000459618 107 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 RPL21P99-201ENST00000480369 423 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 AL049873.1-201ENST00000480540 376 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.24□□□□□ -1.89
CDT1Q9H211 AC117522.3-201ENST00000507974 584 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 Y_RNA.665-201ENST00000516177 98 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 SCARNA15.1-201ENST00000516384 125 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 RNU6-685P-201ENST00000517088 95 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 RNU6-711P-201ENST00000517255 106 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms