Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AL161670.1-201ENST00000554348 137 ntBASIC1.71□□□□□ -2.14
UPF3BQ9BZI7 MIR4421-201ENST00000578133 69 ntBASIC1.71□□□□□ -2.14
UPF3BQ9BZI7 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
UPF3BQ9BZI7 AC091895.1-201ENST00000624494 256 ntBASIC1.71□□□□□ -2.14
UPF3BQ9BZI7 AL079343.1-201ENST00000572358 1771 ntBASIC1.71□□□□□ -2.14
UPF3BQ9BZI7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
UPF3BQ9BZI7 Z75746.1-201ENST00000440243 2080 ntBASIC1.71□□□□□ -2.14
UPF3BQ9BZI7 RNU1-72P-201ENST00000362976 153 ntBASIC1.7□□□□□ -2.14
UPF3BQ9BZI7 MIR518A2-201ENST00000384966 87 ntBASIC1.7□□□□□ -2.14
UPF3BQ9BZI7 AL079342.2-201ENST00000403367 482 ntBASIC1.7□□□□□ -2.14
UPF3BQ9BZI7 AC127391.1-201ENST00000411737 98 ntBASIC1.7□□□□□ -2.14
UPF3BQ9BZI7 VN1R36P-201ENST00000414936 291 ntBASIC1.7□□□□□ -2.14
UPF3BQ9BZI7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.7□□□□□ -2.14
UPF3BQ9BZI7 MTND6P13-201ENST00000443510 523 ntBASIC1.7□□□□□ -2.14
UPF3BQ9BZI7 AL360221.1-201ENST00000445989 335 ntBASIC1.7□□□□□ -2.14
UPF3BQ9BZI7 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
UPF3BQ9BZI7 HMGB1P35-201ENST00000503360 598 ntBASIC1.7□□□□□ -2.14
UPF3BQ9BZI7 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.7□□□□□ -2.14
UPF3BQ9BZI7 RNU6-583P-201ENST00000516012 92 ntBASIC1.7□□□□□ -2.14
UPF3BQ9BZI7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.7□□□□□ -2.14
UPF3BQ9BZI7 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.7□□□□□ -2.14
UPF3BQ9BZI7 AC092953.2-201ENST00000608000 699 ntBASIC1.7□□□□□ -2.14
UPF3BQ9BZI7 AC009974.1-201ENST00000608881 455 ntBASIC1.7□□□□□ -2.14
UPF3BQ9BZI7 RMST_6.1-201ENST00000611980 203 ntBASIC1.7□□□□□ -2.14
UPF3BQ9BZI7 AC003001.2-201ENST00000616294 831 ntBASIC1.7□□□□□ -2.14
UPF3BQ9BZI7 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 Y_RNA.36-201ENST00000362602 112 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 RNU6-1167P-201ENST00000363227 94 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 RNU6-343P-201ENST00000364709 104 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 MIR1302-8-201ENST00000408342 128 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 RNU6-174P-201ENST00000410406 106 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 AL160275.3-201ENST00000423876 471 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 ISCA1P1-201ENST00000426679 387 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 RSU1P2-202ENST00000437884 485 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 COX7BP2-201ENST00000437976 242 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 MTCO3P45-201ENST00000443036 613 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 AC079776.3-201ENST00000450665 370 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 AC244505.3-201ENST00000454598 187 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 RNU7-136P-201ENST00000458819 69 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 AC027575.1-201ENST00000481064 460 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 HMGB1P28-201ENST00000507778 552 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 SNORA31.24-201ENST00000517232 57 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 MTCO3P15-201ENST00000526563 574 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 AC135279.1-201ENST00000543493 504 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 AL121821.2-201ENST00000556081 394 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 AC090079.2-201ENST00000575289 768 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 AC026271.5-201ENST00000577873 130 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 AL583856.2-201ENST00000606298 543 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 AC126118.1-201ENST00000607744 628 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 AC008759.3-201ENST00000613300 508 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 AL353770.2-201ENST00000620024 78 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.69□□□□□ -2.14
UPF3BQ9BZI7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 RNU6-1207P-201ENST00000384343 107 ntBASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 RNU6-1122P-201ENST00000384449 107 ntBASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 PTGES3P2-201ENST00000407942 482 ntBASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 AL449283.1-202ENST00000418249 604 ntBASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 VN1R108P-201ENST00000431580 830 ntBASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 FABP5P15-201ENST00000453566 214 ntBASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 AC034114.1-201ENST00000520293 285 ntBASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 AC022254.1-201ENST00000567857 235 ntBASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 VN1R87P-201ENST00000596706 487 ntBASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 AC069545.1-201ENST00000605671 358 ntBASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 RNU6-91P-201ENST00000607774 107 ntBASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 AC097468.3-201ENST00000607956 456 ntBASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 AP005229.2-201ENST00000609980 697 ntBASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 MIR6078-201ENST00000611069 100 ntBASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
UPF3BQ9BZI7 AC092447.10-201ENST00000620607 1652 ntBASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 SNORA25B-201ENST00000365507 128 ntBASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 RNU6-432P-201ENST00000384196 109 ntBASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 RNU6-342P-201ENST00000384521 104 ntBASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 RNU6-952P-201ENST00000391164 108 ntBASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 CISD1P1-201ENST00000393907 327 ntBASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 AC074117.2-201ENST00000417130 397 ntBASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 EIF4EP2-201ENST00000422816 654 ntBASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 AC104563.1-201ENST00000476147 376 ntBASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 RPL36AP48-201ENST00000485521 314 ntBASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 AC027338.1-201ENST00000514840 825 ntBASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 SMURF2P1-201ENST00000514992 481 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms