Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AL359837.1-201ENST00000381357 287 ntBASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 RNU6-198P-201ENST00000384258 104 ntBASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 RNU6-331P-201ENST00000384724 107 ntBASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 AL590004.1-201ENST00000405321 300 ntBASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 RAB9AP3-201ENST00000412737 573 ntBASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 AC125238.1-201ENST00000448842 249 ntBASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 RAB9AP1-201ENST00000449393 573 ntBASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 AC006026.2-201ENST00000457376 180 ntBASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 SNORA84-201ENST00000459229 133 ntBASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 RPL21P129-201ENST00000491732 478 ntBASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 SCARNA16.2-201ENST00000516520 172 ntBASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 RNA5SP143-201ENST00000516936 115 ntBASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 SNRPGP17-201ENST00000603780 214 ntBASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 MIR92B-201ENST00000607575 96 ntBASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 AC090617.7-201ENST00000623952 126 ntBASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 MIR492-201ENST00000638676 116 ntBASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 AP001148.1-201ENST00000624124 2359 ntBASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 SPRR2C-201ENST00000290702 219 ntBASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 MIR559-201ENST00000385188 96 ntBASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 RNA5SP252-201ENST00000391131 119 ntBASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 RPS29P13-201ENST00000402041 169 ntBASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 AL358472.1-201ENST00000431295 329 ntBASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 U3.44-201ENST00000458938 192 ntBASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 AC010265.1-201ENST00000513509 211 ntBASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 ACA59.1-201ENST00000515966 143 ntBASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 ELOCP31-201ENST00000540463 467 ntBASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 OR8R1P-201ENST00000543943 764 ntBASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 AC021739.1-201ENST00000559631 174 ntBASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 AC018889.1-201ENST00000605372 397 ntBASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 MTND4P27-201ENST00000450813 1354 ntBASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 ADAM3A-203ENST00000461344 2157 ntBASIC4.12□□□□□ -1.75
TRIM55Q9BYV6 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 AC010680.1-201ENST00000590024 3590 ntBASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 MIR372-201ENST00000362225 67 ntBASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 RNU6-105P-201ENST00000363909 104 ntBASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 RNU6-596P-201ENST00000365395 98 ntBASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 U8.8-201ENST00000365399 135 ntBASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 RNU6-174P-201ENST00000410406 106 ntBASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 RNU6-1077P-201ENST00000410506 102 ntBASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 RPL23AP52-201ENST00000439311 478 ntBASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 RPL23AP81-201ENST00000455252 467 ntBASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 AC034236.1-201ENST00000469891 373 ntBASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 RPS29P19-201ENST00000479709 171 ntBASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 RNU6-581P-201ENST00000516214 105 ntBASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 GNRHR2P1-201ENST00000555315 631 ntBASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 AC244505.7-201ENST00000599675 272 ntBASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 uc_338.13-201ENST00000618243 179 ntBASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 uc_338.22-201ENST00000622722 187 ntBASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 FP236240.3-201ENST00000623061 327 ntBASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM55Q9BYV6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM55Q9BYV6 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM55Q9BYV6 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM55Q9BYV6 RNU6-1115P-201ENST00000362490 106 ntBASIC4.1□□□□□ -1.75
TRIM55Q9BYV6 RNU6-1280P-201ENST00000365211 107 ntBASIC4.1□□□□□ -1.75
TRIM55Q9BYV6 MIR521-1-201ENST00000384902 87 ntBASIC4.1□□□□□ -1.75
TRIM55Q9BYV6 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM55Q9BYV6 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM55Q9BYV6 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM55Q9BYV6 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM55Q9BYV6 AC133134.1-201ENST00000466800 359 ntBASIC4.1□□□□□ -1.75
TRIM55Q9BYV6 HMGN2P13-201ENST00000476476 274 ntBASIC4.1□□□□□ -1.75
TRIM55Q9BYV6 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms