Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 U2.21-201ENST00000637295 81 ntBASIC3.85□□□□□ -1.79
RTFDC1Q9BY42 AC024614.3-201ENST00000637860 256 ntBASIC3.85□□□□□ -1.79
RTFDC1Q9BY42 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
RTFDC1Q9BY42 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 Y_RNA.100-201ENST00000363141 102 ntBASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 SNORA40C-201ENST00000391285 128 ntBASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 FGF7P8-201ENST00000402994 292 ntBASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 AL139413.1-201ENST00000421309 217 ntBASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 HSPE1P1-201ENST00000421494 318 ntBASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 AL139281.1-201ENST00000422120 335 ntBASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 AC007560.1-201ENST00000426912 237 ntBASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 AL627311.1-201ENST00000431514 115 ntBASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 NEK4P1-201ENST00000433383 879 ntBASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 RPS29P26-201ENST00000477483 171 ntBASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 AC114786.4-201ENST00000508771 728 ntBASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 HIGD1AP13-201ENST00000509878 289 ntBASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 RNU2-69P-201ENST00000516061 100 ntBASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 RNU6-572P-201ENST00000516724 80 ntBASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 AC009812.2-201ENST00000517657 457 ntBASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 AC069113.1-201ENST00000517763 267 ntBASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 AL391261.3-201ENST00000557194 520 ntBASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 AC007938.3-201ENST00000604965 623 ntBASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 AL161629.2-201ENST00000615347 275 ntBASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.84□□□□□ -1.79
RTFDC1Q9BY42 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
RTFDC1Q9BY42 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
RTFDC1Q9BY42 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.84□□□□□ -1.8
RTFDC1Q9BY42 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RTFDC1Q9BY42 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.84□□□□□ -1.8
RTFDC1Q9BY42 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 MIR449A-201ENST00000362113 91 ntBASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 RNU6-778P-201ENST00000363269 103 ntBASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 AL353621.1-201ENST00000418219 243 ntBASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 AL669831.1-202ENST00000428504 417 ntBASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 MYL8P-204ENST00000431574 518 ntBASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 AL121601.2-201ENST00000438019 707 ntBASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 GTF2IP13-201ENST00000438487 386 ntBASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 AC091826.1-201ENST00000514065 313 ntBASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 RNU6-189P-201ENST00000516120 101 ntBASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 AC009902.1-201ENST00000519351 183 ntBASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 AF235103.2-201ENST00000525753 346 ntBASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 AC078814.3-201ENST00000553036 491 ntBASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 MTCO3P24-201ENST00000572729 782 ntBASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 RMST_4.1-201ENST00000616886 107 ntBASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 AP003122.6-201ENST00000623831 495 ntBASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 AP003400.5-201ENST00000624827 617 ntBASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RTFDC1Q9BY42 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 MIR30E-201ENST00000362104 92 ntBASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 RNU6-658P-201ENST00000384606 106 ntBASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 SNORD15B-201ENST00000384714 146 ntBASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 MIR578-201ENST00000384828 96 ntBASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 Y_RNA.623-201ENST00000411128 95 ntBASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 AL360271.2-201ENST00000447710 161 ntBASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 RNU6-1208P-201ENST00000459588 107 ntBASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 AC022493.1-201ENST00000492984 337 ntBASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 MIR892C-201ENST00000516410 77 ntBASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 SNORA31.21-201ENST00000517180 77 ntBASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 CYCSP27-201ENST00000527643 293 ntBASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 TRAV37-201ENST00000553906 342 ntBASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 GTF3AP2-201ENST00000557014 266 ntBASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 AC010653.1-201ENST00000571108 881 ntBASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 LRRC37A5P-203ENST00000580181 585 ntBASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 RNU6-89P-201ENST00000606519 100 ntBASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 AC116312.1-201ENST00000606841 314 ntBASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 RMST_3.1-201ENST00000611651 109 ntBASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 AC006504.8-201ENST00000621046 635 ntBASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 AC000403.1-201ENST00000613696 3585 ntBASIC3.82□□□□□ -1.8
RTFDC1Q9BY42 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 595.6 ms