Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 snoU2_19.2-201ENST00000363024 80 ntBASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 RPS29P13-201ENST00000402041 169 ntBASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 AL160275.2-201ENST00000412010 394 ntBASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 AC007560.1-201ENST00000426912 237 ntBASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 HIGD1AP2-201ENST00000446367 280 ntBASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 RNU7-87P-201ENST00000459343 62 ntBASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 RN7SL354P-201ENST00000469282 294 ntBASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 RPL30P5-201ENST00000494923 336 ntBASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 AC010469.2-201ENST00000496412 480 ntBASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 AC026784.1-201ENST00000507986 352 ntBASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 RNU6-1282P-201ENST00000516735 96 ntBASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 AC100770.1-201ENST00000532310 322 ntBASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 AC005476.1-201ENST00000554427 397 ntBASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 AC005046.1-201ENST00000608515 625 ntBASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 USP8P1-201ENST00000494673 3183 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 SNORA31-201ENST00000362607 130 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 Y_RNA.274-201ENST00000364714 101 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 Y_RNA.405-201ENST00000383979 100 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 Y_RNA.451-201ENST00000384200 100 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 RNU1-44P-201ENST00000384453 163 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 Y_RNA.524-201ENST00000384564 100 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 Y_RNA.561-201ENST00000384694 100 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 TMEM167AP1-201ENST00000423409 219 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 DNAJC19P7-201ENST00000428811 344 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 AC068287.1-201ENST00000430283 295 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 AL445305.1-201ENST00000432577 575 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 AC006026.2-201ENST00000457376 180 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 AC010469.1-201ENST00000463864 576 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 AP000873.1-201ENST00000463987 400 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 RNU6-377P-201ENST00000515965 102 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 RNU6-1338P-201ENST00000516328 91 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 CASP1P1-201ENST00000526345 212 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 AP001781.1-201ENST00000530977 207 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 AC007458.1-201ENST00000542812 373 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 AP002770.2-201ENST00000543613 532 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 HMGB1P14-201ENST00000557424 591 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 BPIFA4P-203ENST00000603168 689 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 AC015813.4-201ENST00000610469 179 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 AL450472.1-202ENST00000637286 180 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 AC010733.2-201ENST00000589496 5702 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 AC125257.1-201ENST00000560400 2930 ntBASIC4.51□□□□□ -1.69
TRIM56Q9BRZ2 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 AC126755.2-208ENST00000327792 462 ntBASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 AC138969.1-213ENST00000331436 462 ntBASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 Y_RNA.150-201ENST00000363562 102 ntBASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 Y_RNA.200-201ENST00000364018 102 ntBASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 MIR298-201ENST00000401212 88 ntBASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 SNORA11-201ENST00000408789 128 ntBASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 RPS29P27-201ENST00000463711 170 ntBASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 RPL21P104-201ENST00000464143 478 ntBASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 PPBPP1-201ENST00000510807 373 ntBASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 RNA5SP468-201ENST00000516782 93 ntBASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 AC005255.1-201ENST00000593748 216 ntBASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 MIR6891-201ENST00000618788 93 ntBASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 HSPA8P1-201ENST00000425843 1833 ntBASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM56Q9BRZ2 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 OR56B2P-202ENST00000641377 2453 ntBASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms