Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 TRAV37-201ENST00000553906 342 ntBASIC3.59□□□□□ -1.83
SMOQ99835 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.59□□□□□ -1.83
SMOQ99835 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.59□□□□□ -1.83
SMOQ99835 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.59□□□□□ -1.83
SMOQ99835 AC080078.3-201ENST00000605407 463 ntBASIC3.59□□□□□ -1.83
SMOQ99835 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.59□□□□□ -1.83
SMOQ99835 Y_RNA.812-201ENST00000610788 101 ntBASIC3.59□□□□□ -1.83
SMOQ99835 Y_RNA.784-201ENST00000613803 101 ntBASIC3.59□□□□□ -1.83
SMOQ99835 Y_RNA.787-201ENST00000616522 101 ntBASIC3.59□□□□□ -1.83
SMOQ99835 Y_RNA.780-201ENST00000617336 101 ntBASIC3.59□□□□□ -1.83
SMOQ99835 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.59□□□□□ -1.83
SMOQ99835 Y_RNA.801-201ENST00000619005 101 ntBASIC3.59□□□□□ -1.83
SMOQ99835 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.59□□□□□ -1.83
SMOQ99835 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SMOQ99835 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SMOQ99835 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
SMOQ99835 AC116096.1-201ENST00000566804 2314 ntBASIC3.58□□□□□ -1.84
SMOQ99835 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SMOQ99835 Y_RNA.33-201ENST00000362591 102 ntBASIC3.58□□□□□ -1.84
SMOQ99835 RNA5SP72-201ENST00000364442 117 ntBASIC3.58□□□□□ -1.84
SMOQ99835 RNA5SP267-201ENST00000364893 126 ntBASIC3.58□□□□□ -1.84
SMOQ99835 RNU6-395P-201ENST00000365662 106 ntBASIC3.58□□□□□ -1.84
SMOQ99835 RNU6-474P-201ENST00000384243 107 ntBASIC3.58□□□□□ -1.84
SMOQ99835 RNU6-95P-201ENST00000384697 107 ntBASIC3.58□□□□□ -1.84
SMOQ99835 MTCYBP4-201ENST00000401524 249 ntBASIC3.58□□□□□ -1.84
SMOQ99835 RNU6-954P-201ENST00000411355 107 ntBASIC3.58□□□□□ -1.84
SMOQ99835 AC005300.1-201ENST00000428401 373 ntBASIC3.58□□□□□ -1.84
SMOQ99835 HMGB1P9-201ENST00000429856 646 ntBASIC3.58□□□□□ -1.84
SMOQ99835 MYL8P-204ENST00000431574 518 ntBASIC3.58□□□□□ -1.84
SMOQ99835 BRK1P2-201ENST00000442875 223 ntBASIC3.58□□□□□ -1.84
SMOQ99835 Y_RNA.639-201ENST00000458981 102 ntBASIC3.58□□□□□ -1.84
SMOQ99835 RNU7-138P-201ENST00000459479 64 ntBASIC3.58□□□□□ -1.84
SMOQ99835 AC079140.5-201ENST00000507882 310 ntBASIC3.58□□□□□ -1.84
SMOQ99835 AC092436.3-201ENST00000511788 257 ntBASIC3.58□□□□□ -1.84
SMOQ99835 RNU6-1170P-201ENST00000515974 106 ntBASIC3.58□□□□□ -1.84
SMOQ99835 SCARNA13-201ENST00000516672 275 ntBASIC3.58□□□□□ -1.84
SMOQ99835 SNORA70.19-201ENST00000516717 90 ntBASIC3.58□□□□□ -1.84
SMOQ99835 RNU6-1213P-201ENST00000517075 94 ntBASIC3.58□□□□□ -1.84
SMOQ99835 ATP5F1P5-201ENST00000526403 760 ntBASIC3.58□□□□□ -1.84
SMOQ99835 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SMOQ99835 AP004242.1-201ENST00000533701 349 ntBASIC3.58□□□□□ -1.84
SMOQ99835 AC026371.1-201ENST00000551867 419 ntBASIC3.58□□□□□ -1.84
SMOQ99835 AC005476.1-201ENST00000554427 397 ntBASIC3.58□□□□□ -1.84
SMOQ99835 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.58□□□□□ -1.84
SMOQ99835 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.58□□□□□ -1.84
SMOQ99835 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.58□□□□□ -1.84
SMOQ99835 AC005034.5-201ENST00000604219 466 ntBASIC3.58□□□□□ -1.84
SMOQ99835 NUTF2P8-201ENST00000604593 363 ntBASIC3.58□□□□□ -1.84
SMOQ99835 AL080274.1-201ENST00000605565 220 ntBASIC3.58□□□□□ -1.84
SMOQ99835 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.58□□□□□ -1.84
SMOQ99835 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SMOQ99835 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SMOQ99835 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.58□□□□□ -1.84
SMOQ99835 AL513302.2-201ENST00000562313 1842 ntBASIC3.58□□□□□ -1.84
SMOQ99835 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.58□□□□□ -1.84
SMOQ99835 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SMOQ99835 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SMOQ99835 SNORD73A-201ENST00000386062 65 ntBASIC3.57□□□□□ -1.84
SMOQ99835 AL138878.1-201ENST00000405131 347 ntBASIC3.57□□□□□ -1.84
SMOQ99835 AL590004.1-201ENST00000405321 300 ntBASIC3.57□□□□□ -1.84
SMOQ99835 MIR548P-201ENST00000408336 84 ntBASIC3.57□□□□□ -1.84
SMOQ99835 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
SMOQ99835 AL159169.1-201ENST00000421119 127 ntBASIC3.57□□□□□ -1.84
SMOQ99835 AC009237.8-201ENST00000445492 379 ntBASIC3.57□□□□□ -1.84
SMOQ99835 MTCO3P10-201ENST00000455912 772 ntBASIC3.57□□□□□ -1.84
SMOQ99835 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.57□□□□□ -1.84
SMOQ99835 MIR2114-201ENST00000516645 80 ntBASIC3.57□□□□□ -1.84
SMOQ99835 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.57□□□□□ -1.84
SMOQ99835 AC009902.1-201ENST00000519351 183 ntBASIC3.57□□□□□ -1.84
SMOQ99835 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.57□□□□□ -1.84
SMOQ99835 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SMOQ99835 TRAV28-201ENST00000557548 323 ntBASIC3.57□□□□□ -1.84
SMOQ99835 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.57□□□□□ -1.84
SMOQ99835 AC006557.5-201ENST00000603126 811 ntBASIC3.57□□□□□ -1.84
SMOQ99835 AC007179.3-201ENST00000604976 235 ntBASIC3.57□□□□□ -1.84
SMOQ99835 RNU6-85P-201ENST00000605989 107 ntBASIC3.57□□□□□ -1.84
SMOQ99835 MIR6128-201ENST00000615528 109 ntBASIC3.57□□□□□ -1.84
SMOQ99835 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.57□□□□□ -1.84
SMOQ99835 AC010378.1-201ENST00000619270 362 ntBASIC3.57□□□□□ -1.84
SMOQ99835 AC098657.3-201ENST00000620434 263 ntBASIC3.57□□□□□ -1.84
SMOQ99835 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.57□□□□□ -1.84
SMOQ99835 AC134503.1-201ENST00000633048 54 ntBASIC3.57□□□□□ -1.84
SMOQ99835 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.57□□□□□ -1.84
SMOQ99835 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SMOQ99835 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.57□□□□□ -1.84
SMOQ99835 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.56□□□□□ -1.84
SMOQ99835 RNU6-384P-201ENST00000364900 104 ntBASIC3.56□□□□□ -1.84
SMOQ99835 Y_RNA.324-201ENST00000365165 102 ntBASIC3.56□□□□□ -1.84
SMOQ99835 MIR325-201ENST00000385260 98 ntBASIC3.56□□□□□ -1.84
SMOQ99835 PTMAP5-201ENST00000393073 333 ntBASIC3.56□□□□□ -1.84
SMOQ99835 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMOQ99835 U3.42-201ENST00000408746 214 ntBASIC3.56□□□□□ -1.84
SMOQ99835 RNU2-37P-201ENST00000410695 177 ntBASIC3.56□□□□□ -1.84
SMOQ99835 AL592148.1-201ENST00000413568 445 ntBASIC3.56□□□□□ -1.84
SMOQ99835 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.56□□□□□ -1.84
SMOQ99835 AC245054.2-201ENST00000415639 319 ntBASIC3.56□□□□□ -1.84
SMOQ99835 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.56□□□□□ -1.84
SMOQ99835 UBE2D3P2-201ENST00000424409 445 ntBASIC3.56□□□□□ -1.84
SMOQ99835 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.56□□□□□ -1.84
SMOQ99835 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms