Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 RPL19P1-201ENST00000411635 428 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RAD9AQ99638 AC092809.3-201ENST00000415453 231 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 Z98742.3-201ENST00000418637 326 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 AC003685.2-201ENST00000422795 395 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 AL591212.2-201ENST00000433923 257 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 AC112220.1-201ENST00000434628 355 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 RPS15AP9-201ENST00000439856 381 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 AL714022.1-201ENST00000439897 151 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 DDX3P2-201ENST00000446138 111 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 CECR9-201ENST00000453421 199 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.86□□□□□ -1.95
RAD9AQ99638 AC022364.2-201ENST00000457963 554 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 AP004217.1-201ENST00000480579 346 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 RPL9P6-201ENST00000492764 598 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 AC079382.1-201ENST00000493346 557 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 RPS29P21-201ENST00000496272 170 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 AC108078.2-201ENST00000510750 236 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 Y_RNA.689-201ENST00000516589 107 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 RNU6-143P-201ENST00000516942 93 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.86□□□□□ -1.95
RAD9AQ99638 OR4R1P-201ENST00000529879 463 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.86□□□□□ -1.95
RAD9AQ99638 BNIP3P9-201ENST00000603714 553 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 AC022893.3-201ENST00000607665 437 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 AC084782.3-201ENST00000612282 578 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 AC130324.3-201ENST00000614165 542 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
RAD9AQ99638 AL158209.2-201ENST00000619266 216 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 AC098679.4-201ENST00000624241 654 ntBASIC2.86□□□□□ -1.95
RAD9AQ99638 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RAD9AQ99638 AC008669.1-201ENST00000565823 2178 ntBASIC2.85□□□□□ -1.95
RAD9AQ99638 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
RAD9AQ99638 Y_RNA.1-201ENST00000352915 104 ntBASIC2.85□□□□□ -1.95
RAD9AQ99638 RNU6-179P-201ENST00000363350 107 ntBASIC2.85□□□□□ -1.95
RAD9AQ99638 Y_RNA.159-201ENST00000363674 87 ntBASIC2.85□□□□□ -1.95
RAD9AQ99638 MIR181B1-201ENST00000385240 110 ntBASIC2.85□□□□□ -1.95
RAD9AQ99638 RNU4-55P-201ENST00000410731 137 ntBASIC2.85□□□□□ -1.95
RAD9AQ99638 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.85□□□□□ -1.95
RAD9AQ99638 BX682237.1-201ENST00000415016 335 ntBASIC2.85□□□□□ -1.95
RAD9AQ99638 MTATP6P18-201ENST00000417994 673 ntBASIC2.85□□□□□ -1.95
RAD9AQ99638 AL109913.1-201ENST00000421173 514 ntBASIC2.85□□□□□ -1.95
RAD9AQ99638 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.85□□□□□ -1.95
RAD9AQ99638 MTND1P1-201ENST00000445453 368 ntBASIC2.85□□□□□ -1.95
RAD9AQ99638 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RAD9AQ99638 RPL12P25-201ENST00000455592 494 ntBASIC2.85□□□□□ -1.95
RAD9AQ99638 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.85□□□□□ -1.95
RAD9AQ99638 RNU7-23P-201ENST00000459465 62 ntBASIC2.85□□□□□ -1.95
RAD9AQ99638 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.85□□□□□ -1.95
RAD9AQ99638 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.85□□□□□ -1.95
RAD9AQ99638 RNA5SP76-201ENST00000516277 87 ntBASIC2.85□□□□□ -1.95
RAD9AQ99638 MTCYBP20-201ENST00000524239 1129 ntBASIC2.85□□□□□ -1.95
RAD9AQ99638 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.85□□□□□ -1.95
RAD9AQ99638 AC068135.2-201ENST00000569293 1028 ntBASIC2.85□□□□□ -1.95
RAD9AQ99638 AL391646.1-201ENST00000603860 190 ntBASIC2.85□□□□□ -1.95
RAD9AQ99638 AC025449.1-201ENST00000603896 529 ntBASIC2.85□□□□□ -1.95
RAD9AQ99638 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RAD9AQ99638 AC004852.3-201ENST00000614131 326 ntBASIC2.85□□□□□ -1.95
RAD9AQ99638 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.85□□□□□ -1.95
RAD9AQ99638 AC073534.2-201ENST00000620377 381 ntBASIC2.85□□□□□ -1.95
RAD9AQ99638 AL359740.1-201ENST00000624340 592 ntBASIC2.85□□□□□ -1.95
RAD9AQ99638 AC099654.12-201ENST00000639868 649 ntBASIC2.85□□□□□ -1.95
RAD9AQ99638 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.85□□□□□ -1.95
RAD9AQ99638 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.85□□□□□ -1.95
RAD9AQ99638 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RAD9AQ99638 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.84□□□□□ -1.95
RAD9AQ99638 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
RAD9AQ99638 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
RAD9AQ99638 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
RAD9AQ99638 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RAD9AQ99638 MTND5P17-201ENST00000418405 1603 ntBASIC2.84□□□□□ -1.95
RAD9AQ99638 Y_RNA.3-201ENST00000362331 103 ntBASIC2.84□□□□□ -1.95
RAD9AQ99638 SNORD62.1-201ENST00000362541 86 ntBASIC2.84□□□□□ -1.95
RAD9AQ99638 RNU6-1120P-201ENST00000362988 108 ntBASIC2.84□□□□□ -1.95
RAD9AQ99638 RNU1-105P-201ENST00000363470 161 ntBASIC2.84□□□□□ -1.95
RAD9AQ99638 RNU6-61P-201ENST00000365528 109 ntBASIC2.84□□□□□ -1.95
RAD9AQ99638 RNU2-9P-201ENST00000410194 145 ntBASIC2.84□□□□□ -1.95
RAD9AQ99638 RNU4-53P-201ENST00000410828 140 ntBASIC2.84□□□□□ -1.95
RAD9AQ99638 RNU2-68P-201ENST00000410878 191 ntBASIC2.84□□□□□ -1.95
RAD9AQ99638 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RAD9AQ99638 MTCO2P19-201ENST00000427513 598 ntBASIC2.84□□□□□ -1.95
RAD9AQ99638 AL592045.1-201ENST00000429867 352 ntBASIC2.84□□□□□ -1.95
RAD9AQ99638 MRPS17P3-201ENST00000465453 385 ntBASIC2.84□□□□□ -1.95
RAD9AQ99638 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.84□□□□□ -1.95
RAD9AQ99638 SNORD27.1-201ENST00000516319 72 ntBASIC2.84□□□□□ -1.95
RAD9AQ99638 RNA5SP165-201ENST00000517142 115 ntBASIC2.84□□□□□ -1.95
RAD9AQ99638 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.84□□□□□ -1.95
RAD9AQ99638 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.84□□□□□ -1.95
RAD9AQ99638 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.84□□□□□ -1.95
RAD9AQ99638 EIF1P4-201ENST00000572664 335 ntBASIC2.84□□□□□ -1.95
RAD9AQ99638 AC007621.1-201ENST00000604544 437 ntBASIC2.84□□□□□ -1.95
RAD9AQ99638 AL158032.1-201ENST00000605401 106 ntBASIC2.84□□□□□ -1.95
RAD9AQ99638 AC012557.2-201ENST00000605919 418 ntBASIC2.84□□□□□ -1.95
RAD9AQ99638 DUSP12P1-201ENST00000612874 516 ntBASIC2.84□□□□□ -1.95
RAD9AQ99638 U4.3-201ENST00000621047 82 ntBASIC2.84□□□□□ -1.95
RAD9AQ99638 AC124864.2-201ENST00000624736 186 ntBASIC2.84□□□□□ -1.95
RAD9AQ99638 MIR6863-201ENST00000636112 90 ntBASIC2.84□□□□□ -1.95
RAD9AQ99638 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.84□□□□□ -1.95
RAD9AQ99638 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
RAD9AQ99638 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 357.5 ms