Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 RNA5SP450-201ENST00000411206 102 ntBASIC1.47□□□□□ -2.17
SCAF11Q99590 DPRXP1-201ENST00000426312 460 ntBASIC1.47□□□□□ -2.17
SCAF11Q99590 ZNF863P-201ENST00000426746 417 ntBASIC1.47□□□□□ -2.17
SCAF11Q99590 AC007919.1-201ENST00000429380 217 ntBASIC1.47□□□□□ -2.17
SCAF11Q99590 RPL17P35-201ENST00000432217 549 ntBASIC1.47□□□□□ -2.17
SCAF11Q99590 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.47□□□□□ -2.17
SCAF11Q99590 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.47□□□□□ -2.17
SCAF11Q99590 RPS27P1-201ENST00000450552 247 ntBASIC1.47□□□□□ -2.17
SCAF11Q99590 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.47□□□□□ -2.17
SCAF11Q99590 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.47□□□□□ -2.17
SCAF11Q99590 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.47□□□□□ -2.17
SCAF11Q99590 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.47□□□□□ -2.17
SCAF11Q99590 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.47□□□□□ -2.17
SCAF11Q99590 AP004247.1-201ENST00000531556 1289 ntBASIC1.47□□□□□ -2.17
SCAF11Q99590 AC008269.2-201ENST00000561915 1105 ntBASIC1.47□□□□□ -2.17
SCAF11Q99590 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.47□□□□□ -2.17
SCAF11Q99590 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.47□□□□□ -2.17
SCAF11Q99590 AP000403.1-201ENST00000603349 851 ntBASIC1.47□□□□□ -2.17
SCAF11Q99590 AL583856.2-201ENST00000606298 543 ntBASIC1.47□□□□□ -2.17
SCAF11Q99590 AL050343.2-201ENST00000607338 280 ntBASIC1.47□□□□□ -2.17
SCAF11Q99590 AC092140.2-201ENST00000618027 521 ntBASIC1.47□□□□□ -2.17
SCAF11Q99590 MTND1P37-201ENST00000636562 264 ntBASIC1.47□□□□□ -2.17
SCAF11Q99590 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
SCAF11Q99590 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.47□□□□□ -2.17
SCAF11Q99590 RNU6-884P-201ENST00000363889 107 ntBASIC1.46□□□□□ -2.18
SCAF11Q99590 RNU6-207P-201ENST00000384137 107 ntBASIC1.46□□□□□ -2.18
SCAF11Q99590 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
SCAF11Q99590 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.46□□□□□ -2.18
SCAF11Q99590 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.46□□□□□ -2.18
SCAF11Q99590 AL139421.1-201ENST00000423010 169 ntBASIC1.46□□□□□ -2.18
SCAF11Q99590 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.46□□□□□ -2.18
SCAF11Q99590 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.46□□□□□ -2.18
SCAF11Q99590 RPS15AP5-201ENST00000436276 388 ntBASIC1.46□□□□□ -2.18
SCAF11Q99590 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.46□□□□□ -2.18
SCAF11Q99590 CYB5AP5-201ENST00000549779 389 ntBASIC1.46□□□□□ -2.18
SCAF11Q99590 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.46□□□□□ -2.18
SCAF11Q99590 MIR4714-201ENST00000580728 77 ntBASIC1.46□□□□□ -2.18
SCAF11Q99590 AL390208.1-201ENST00000605885 644 ntBASIC1.46□□□□□ -2.18
SCAF11Q99590 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.46□□□□□ -2.18
SCAF11Q99590 AC013476.2-201ENST00000614456 459 ntBASIC1.46□□□□□ -2.18
SCAF11Q99590 AL354696.1-201ENST00000614652 497 ntBASIC1.46□□□□□ -2.18
SCAF11Q99590 AL603758.1-201ENST00000618654 241 ntBASIC1.46□□□□□ -2.18
SCAF11Q99590 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.46□□□□□ -2.18
SCAF11Q99590 AL442644.1-201ENST00000454390 3105 ntBASIC1.46□□□□□ -2.18
SCAF11Q99590 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SCAF11Q99590 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
SCAF11Q99590 MIR888-201ENST00000401186 77 ntBASIC1.45□□□□□ -2.18
SCAF11Q99590 DHFRP6-201ENST00000401776 268 ntBASIC1.45□□□□□ -2.18
SCAF11Q99590 RNU2-49P-201ENST00000410666 184 ntBASIC1.45□□□□□ -2.18
SCAF11Q99590 USP9YP19-201ENST00000412165 485 ntBASIC1.45□□□□□ -2.18
SCAF11Q99590 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.45□□□□□ -2.18
SCAF11Q99590 USP9YP13-201ENST00000417797 480 ntBASIC1.45□□□□□ -2.18
SCAF11Q99590 AC092634.2-201ENST00000428146 1010 ntBASIC1.45□□□□□ -2.18
SCAF11Q99590 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.45□□□□□ -2.18
SCAF11Q99590 AC002381.1-201ENST00000447049 280 ntBASIC1.45□□□□□ -2.18
SCAF11Q99590 RPL26P9-201ENST00000457466 433 ntBASIC1.45□□□□□ -2.18
SCAF11Q99590 RPL31P58-201ENST00000469001 379 ntBASIC1.45□□□□□ -2.18
SCAF11Q99590 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.45□□□□□ -2.18
SCAF11Q99590 AC093677.1-201ENST00000514414 678 ntBASIC1.45□□□□□ -2.18
SCAF11Q99590 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.45□□□□□ -2.18
SCAF11Q99590 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.45□□□□□ -2.18
SCAF11Q99590 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.45□□□□□ -2.18
SCAF11Q99590 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.45□□□□□ -2.18
SCAF11Q99590 SNORD114-21-201ENST00000606412 72 ntBASIC1.45□□□□□ -2.18
SCAF11Q99590 AC108706.1-201ENST00000611053 297 ntBASIC1.45□□□□□ -2.18
SCAF11Q99590 AC078880.5-201ENST00000617845 421 ntBASIC1.45□□□□□ -2.18
SCAF11Q99590 AC010975.3-201ENST00000618727 978 ntBASIC1.45□□□□□ -2.18
SCAF11Q99590 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.45□□□□□ -2.18
SCAF11Q99590 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.44□□□□□ -2.18
SCAF11Q99590 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SCAF11Q99590 Y_RNA.548-201ENST00000384656 105 ntBASIC1.44□□□□□ -2.18
SCAF11Q99590 MIR513A1-201ENST00000385138 129 ntBASIC1.44□□□□□ -2.18
SCAF11Q99590 RPL22P22-201ENST00000395439 379 ntBASIC1.44□□□□□ -2.18
SCAF11Q99590 HMGB1P9-201ENST00000429856 646 ntBASIC1.44□□□□□ -2.18
SCAF11Q99590 MTND4P15-201ENST00000437913 1033 ntBASIC1.44□□□□□ -2.18
SCAF11Q99590 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.44□□□□□ -2.18
SCAF11Q99590 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.44□□□□□ -2.18
SCAF11Q99590 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.44□□□□□ -2.18
SCAF11Q99590 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.44□□□□□ -2.18
SCAF11Q99590 AC023141.11-201ENST00000508864 202 ntBASIC1.44□□□□□ -2.18
SCAF11Q99590 COL6A4P2-205ENST00000509855 506 ntBASIC1.44□□□□□ -2.18
SCAF11Q99590 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.44□□□□□ -2.18
SCAF11Q99590 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.44□□□□□ -2.18
SCAF11Q99590 AL445435.1-201ENST00000604232 665 ntBASIC1.44□□□□□ -2.18
SCAF11Q99590 AL118556.2-201ENST00000614375 824 ntBASIC1.44□□□□□ -2.18
SCAF11Q99590 AC253576.2-201ENST00000618815 580 ntBASIC1.44□□□□□ -2.18
SCAF11Q99590 AC120349.2-201ENST00000625002 298 ntBASIC1.44□□□□□ -2.18
SCAF11Q99590 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.44□□□□□ -2.18
SCAF11Q99590 TEX21P-201ENST00000447107 1476 ntBASIC1.44□□□□□ -2.18
SCAF11Q99590 AC107982.1-201ENST00000507171 1300 ntBASIC1.44□□□□□ -2.18
SCAF11Q99590 SNORA16B-201ENST00000364674 135 ntBASIC1.43□□□□□ -2.18
SCAF11Q99590 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
SCAF11Q99590 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
SCAF11Q99590 SNORD65.1-201ENST00000390889 71 ntBASIC1.43□□□□□ -2.18
SCAF11Q99590 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.43□□□□□ -2.18
SCAF11Q99590 CBX3P6-201ENST00000430257 527 ntBASIC1.43□□□□□ -2.18
SCAF11Q99590 MED14P1-201ENST00000430517 648 ntBASIC1.43□□□□□ -2.18
SCAF11Q99590 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.43□□□□□ -2.18
SCAF11Q99590 GDI2P2-201ENST00000445131 608 ntBASIC1.43□□□□□ -2.18
SCAF11Q99590 MTATP6P7-201ENST00000453315 681 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms