Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTCHD1Q96NR3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTCHD1Q96NR3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 AC007785.2-201ENST00000598627 1916 ntBASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 RNU6-227P-201ENST00000362865 103 ntBASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 RNU1-76P-201ENST00000362903 159 ntBASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 Y_RNA.562-201ENST00000384695 113 ntBASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 MTCYBP2-201ENST00000407745 171 ntBASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 RPL17P36-201ENST00000420302 549 ntBASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 LINC01399-202ENST00000458450 244 ntBASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 snoU109.2-201ENST00000459316 135 ntBASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 RN7SL691P-201ENST00000494487 301 ntBASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 AC078918.1-201ENST00000498515 228 ntBASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 AL592156.1-201ENST00000508758 304 ntBASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 MTND1P19-201ENST00000511780 315 ntBASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 RNU6-1023P-201ENST00000516137 106 ntBASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 RNU6-570P-201ENST00000517051 105 ntBASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 CYCSP29-201ENST00000533731 318 ntBASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 MIR4697-201ENST00000582977 78 ntBASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 AC136601.2-201ENST00000604356 474 ntBASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 AL590392.1-201ENST00000604960 446 ntBASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 FAM27D1-201ENST00000612308 341 ntBASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 AL445567.2-201ENST00000618935 498 ntBASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 Z75746.1-201ENST00000440243 2080 ntBASIC4.01□□□□□ -1.77
PTCHD1Q96NR3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4□□□□□ -1.77
PTCHD1Q96NR3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
PTCHD1Q96NR3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4□□□□□ -1.77
PTCHD1Q96NR3 MTND5P6-201ENST00000422338 1798 ntBASIC4□□□□□ -1.77
PTCHD1Q96NR3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4□□□□□ -1.77
PTCHD1Q96NR3 Y_RNA.183-201ENST00000363882 113 ntBASIC4□□□□□ -1.77
PTCHD1Q96NR3 SNORA7.2-201ENST00000364446 145 ntBASIC4□□□□□ -1.77
PTCHD1Q96NR3 SNORA70.2-201ENST00000364506 135 ntBASIC4□□□□□ -1.77
PTCHD1Q96NR3 SNORA20.1-201ENST00000364790 130 ntBASIC4□□□□□ -1.77
PTCHD1Q96NR3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4□□□□□ -1.77
PTCHD1Q96NR3 AC068538.1-201ENST00000376856 336 ntBASIC4□□□□□ -1.77
PTCHD1Q96NR3 Y_RNA.477-201ENST00000384352 108 ntBASIC4□□□□□ -1.77
PTCHD1Q96NR3 MIR190B-201ENST00000401119 79 ntBASIC4□□□□□ -1.77
PTCHD1Q96NR3 AC092017.2-201ENST00000427600 362 ntBASIC4□□□□□ -1.77
PTCHD1Q96NR3 MTCO3P29-201ENST00000432119 779 ntBASIC4□□□□□ -1.77
PTCHD1Q96NR3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4□□□□□ -1.77
PTCHD1Q96NR3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4□□□□□ -1.77
PTCHD1Q96NR3 SNRPEP9-201ENST00000436794 238 ntBASIC4□□□□□ -1.77
PTCHD1Q96NR3 Z82210.1-201ENST00000440037 231 ntBASIC4□□□□□ -1.77
PTCHD1Q96NR3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4□□□□□ -1.77
PTCHD1Q96NR3 AC005921.1-201ENST00000510589 286 ntBASIC4□□□□□ -1.77
PTCHD1Q96NR3 AC074250.1-201ENST00000511117 192 ntBASIC4□□□□□ -1.77
PTCHD1Q96NR3 AC108043.1-201ENST00000512696 574 ntBASIC4□□□□□ -1.77
PTCHD1Q96NR3 AC091144.1-201ENST00000519573 138 ntBASIC4□□□□□ -1.77
PTCHD1Q96NR3 AC006064.5-201ENST00000541782 248 ntBASIC4□□□□□ -1.77
PTCHD1Q96NR3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4□□□□□ -1.77
PTCHD1Q96NR3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4□□□□□ -1.77
PTCHD1Q96NR3 AC243829.7-201ENST00000633081 225 ntBASIC4□□□□□ -1.77
PTCHD1Q96NR3 U4.7-201ENST00000638126 106 ntBASIC4□□□□□ -1.77
PTCHD1Q96NR3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PTCHD1Q96NR3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4□□□□□ -1.77
PTCHD1Q96NR3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4□□□□□ -1.77
PTCHD1Q96NR3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4□□□□□ -1.77
PTCHD1Q96NR3 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PTCHD1Q96NR3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4□□□□□ -1.77
PTCHD1Q96NR3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 RNU1-15P-201ENST00000353977 144 ntBASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 Y_RNA.27-201ENST00000362540 103 ntBASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 Y_RNA.123-201ENST00000363338 102 ntBASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 RNU6-336P-201ENST00000364891 107 ntBASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 RNA5SP189-201ENST00000364920 115 ntBASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 Y_RNA.518-201ENST00000384552 113 ntBASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 RPS29P13-201ENST00000402041 169 ntBASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 RNU6-130P-201ENST00000411112 103 ntBASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 RAC1P3-201ENST00000416129 580 ntBASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 AC091390.1-201ENST00000433904 331 ntBASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 ABCF2P2-201ENST00000450549 296 ntBASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 TRBVB-201ENST00000477100 408 ntBASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 RPS29P19-201ENST00000479709 171 ntBASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 MRPL49P2-201ENST00000521066 465 ntBASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 AP003730.1-201ENST00000524605 285 ntBASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 AP004242.1-201ENST00000533701 349 ntBASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 AC007458.1-201ENST00000542812 373 ntBASIC3.99□□□□□ -1.77
PTCHD1Q96NR3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms