Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AL132822.1-201ENST00000617063 513 ntBASIC0.09□□□□□ -2.4
CFAP54Q96N23 AC068880.5-201ENST00000624331 290 ntBASIC0.09□□□□□ -2.4
CFAP54Q96N23 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
CFAP54Q96N23 MTND4P14-201ENST00000435799 1354 ntBASIC0.08□□□□□ -2.4
CFAP54Q96N23 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC0.08□□□□□ -2.4
CFAP54Q96N23 RNU6-491P-201ENST00000516099 110 ntBASIC0.08□□□□□ -2.4
CFAP54Q96N23 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.08□□□□□ -2.4
CFAP54Q96N23 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.08□□□□□ -2.4
CFAP54Q96N23 MIR4422-201ENST00000581938 83 ntBASIC0.08□□□□□ -2.4
CFAP54Q96N23 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.08□□□□□ -2.4
CFAP54Q96N23 MIR365A-201ENST00000362260 87 ntBASIC0.08□□□□□ -2.4
CFAP54Q96N23 U8.7-201ENST00000364940 136 ntBASIC0.08□□□□□ -2.4
CFAP54Q96N23 RNU6-514P-201ENST00000384208 107 ntBASIC0.08□□□□□ -2.4
CFAP54Q96N23 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.08□□□□□ -2.4
CFAP54Q96N23 AC244098.2-201ENST00000422068 99 ntBASIC0.08□□□□□ -2.4
CFAP54Q96N23 MTND1P16-201ENST00000465177 898 ntBASIC0.08□□□□□ -2.4
CFAP54Q96N23 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.08□□□□□ -2.4
CFAP54Q96N23 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.08□□□□□ -2.4
CFAP54Q96N23 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.08□□□□□ -2.4
CFAP54Q96N23 AC109635.4-202ENST00000531666 412 ntBASIC0.08□□□□□ -2.4
CFAP54Q96N23 MIR5093-201ENST00000583199 100 ntBASIC0.08□□□□□ -2.4
CFAP54Q96N23 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.08□□□□□ -2.4
CFAP54Q96N23 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.08□□□□□ -2.4
CFAP54Q96N23 SNORD18A-201ENST00000363753 72 ntBASIC0.07□□□□□ -2.4
CFAP54Q96N23 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
CFAP54Q96N23 AL355615.1-201ENST00000406187 641 ntBASIC0.07□□□□□ -2.4
CFAP54Q96N23 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.07□□□□□ -2.4
CFAP54Q96N23 BTF3P11-201ENST00000426582 477 ntBASIC0.07□□□□□ -2.4
CFAP54Q96N23 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC0.07□□□□□ -2.4
CFAP54Q96N23 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC0.07□□□□□ -2.4
CFAP54Q96N23 AL590365.1-201ENST00000450788 243 ntBASIC0.07□□□□□ -2.4
CFAP54Q96N23 RPS26P45-201ENST00000471748 340 ntBASIC0.07□□□□□ -2.4
CFAP54Q96N23 AC011406.1-201ENST00000512440 370 ntBASIC0.07□□□□□ -2.4
CFAP54Q96N23 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC0.07□□□□□ -2.4
CFAP54Q96N23 RNU6-782P-201ENST00000516852 104 ntBASIC0.07□□□□□ -2.4
CFAP54Q96N23 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC0.07□□□□□ -2.4
CFAP54Q96N23 RPL21P66-201ENST00000426566 466 ntBASIC0.07□□□□□ -2.4
CFAP54Q96N23 AC145146.1-201ENST00000496370 254 ntBASIC0.07□□□□□ -2.4
CFAP54Q96N23 RNU7-40P-201ENST00000516397 64 ntBASIC0.07□□□□□ -2.4
CFAP54Q96N23 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.07□□□□□ -2.4
CFAP54Q96N23 Z83818.1-201ENST00000603584 150 ntBASIC0.07□□□□□ -2.4
CFAP54Q96N23 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC0.07□□□□□ -2.4
CFAP54Q96N23 SNORA32.3-201ENST00000384772 121 ntBASIC0.07□□□□□ -2.4
CFAP54Q96N23 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.07□□□□□ -2.4
CFAP54Q96N23 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.07□□□□□ -2.4
CFAP54Q96N23 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.07□□□□□ -2.4
CFAP54Q96N23 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.07□□□□□ -2.4
CFAP54Q96N23 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
CFAP54Q96N23 PDCL2P1-201ENST00000419302 352 ntBASIC0.06□□□□□ -2.4
CFAP54Q96N23 SEPT2P1-201ENST00000419651 180 ntBASIC0.06□□□□□ -2.4
CFAP54Q96N23 BPY2DP-201ENST00000422208 265 ntBASIC0.06□□□□□ -2.4
CFAP54Q96N23 AC104417.1-201ENST00000523974 751 ntBASIC0.06□□□□□ -2.4
CFAP54Q96N23 MIR4713-201ENST00000582691 75 ntBASIC0.06□□□□□ -2.4
CFAP54Q96N23 OR1M4P-201ENST00000589199 287 ntBASIC0.06□□□□□ -2.4
CFAP54Q96N23 MIR30A-201ENST00000385092 71 ntBASIC0.06□□□□□ -2.4
CFAP54Q96N23 AL356421.1-201ENST00000403255 413 ntBASIC0.06□□□□□ -2.4
CFAP54Q96N23 RNU6-1064P-201ENST00000410626 104 ntBASIC0.06□□□□□ -2.4
CFAP54Q96N23 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.06□□□□□ -2.4
CFAP54Q96N23 MTND4LP11-201ENST00000422184 280 ntBASIC0.06□□□□□ -2.4
CFAP54Q96N23 AC087588.1-201ENST00000462203 316 ntBASIC0.06□□□□□ -2.4
CFAP54Q96N23 AC114982.1-201ENST00000469402 321 ntBASIC0.06□□□□□ -2.4
CFAP54Q96N23 SNORD115-41-201ENST00000363608 82 ntBASIC0.05□□□□□ -2.4
CFAP54Q96N23 Y_RNA.375-201ENST00000365625 101 ntBASIC0.05□□□□□ -2.4
CFAP54Q96N23 RNU6-1222P-201ENST00000384615 107 ntBASIC0.05□□□□□ -2.4
CFAP54Q96N23 Y_RNA.568-201ENST00000384742 113 ntBASIC0.05□□□□□ -2.4
CFAP54Q96N23 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.05□□□□□ -2.4
CFAP54Q96N23 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC0.05□□□□□ -2.4
CFAP54Q96N23 AC009712.1-201ENST00000564938 316 ntBASIC0.05□□□□□ -2.4
CFAP54Q96N23 MIR5571-201ENST00000577998 113 ntBASIC0.05□□□□□ -2.4
CFAP54Q96N23 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.05□□□□□ -2.4
CFAP54Q96N23 AL159152.1-201ENST00000635019 2587 ntBASIC0.05□□□□□ -2.4
CFAP54Q96N23 Y_RNA.52-201ENST00000362760 96 ntBASIC0.05□□□□□ -2.4
CFAP54Q96N23 SNORD114-16-201ENST00000363044 70 ntBASIC0.05□□□□□ -2.4
CFAP54Q96N23 SNORA25.3-201ENST00000363205 127 ntBASIC0.05□□□□□ -2.4
CFAP54Q96N23 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.05□□□□□ -2.4
CFAP54Q96N23 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.05□□□□□ -2.4
CFAP54Q96N23 AC087879.1-201ENST00000474343 374 ntBASIC0.05□□□□□ -2.4
CFAP54Q96N23 NCOR1P1-202ENST00000486162 291 ntBASIC0.05□□□□□ -2.4
CFAP54Q96N23 AC023050.1-201ENST00000498198 304 ntBASIC0.05□□□□□ -2.4
CFAP54Q96N23 SCARNA16.5-201ENST00000517114 183 ntBASIC0.05□□□□□ -2.4
CFAP54Q96N23 RNA5SP404-201ENST00000517118 132 ntBASIC0.05□□□□□ -2.4
CFAP54Q96N23 SCARNA11.3-201ENST00000517276 130 ntBASIC0.05□□□□□ -2.4
CFAP54Q96N23 MTCYBP41-201ENST00000528913 1123 ntBASIC0.05□□□□□ -2.4
CFAP54Q96N23 AC100812.1-201ENST00000607622 580 ntBASIC0.05□□□□□ -2.4
CFAP54Q96N23 MIR8065-201ENST00000620577 100 ntBASIC0.05□□□□□ -2.4
CFAP54Q96N23 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
CFAP54Q96N23 U3.9-201ENST00000363823 204 ntBASIC0.05□□□□□ -2.4
CFAP54Q96N23 RPS3AP24-201ENST00000407896 734 ntBASIC0.05□□□□□ -2.4
CFAP54Q96N23 ARPC3P5-201ENST00000448802 534 ntBASIC0.05□□□□□ -2.4
CFAP54Q96N23 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.05□□□□□ -2.4
CFAP54Q96N23 SCARNA16.2-201ENST00000516520 172 ntBASIC0.05□□□□□ -2.4
CFAP54Q96N23 AC022690.1-201ENST00000526681 550 ntBASIC0.05□□□□□ -2.4
CFAP54Q96N23 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
CFAP54Q96N23 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.05□□□□□ -2.4
CFAP54Q96N23 AC023934.1-201ENST00000574529 2389 ntBASIC0.04□□□□□ -2.4
CFAP54Q96N23 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
CFAP54Q96N23 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.04□□□□□ -2.4
CFAP54Q96N23 HSPE1P13-201ENST00000451143 297 ntBASIC0.04□□□□□ -2.4
CFAP54Q96N23 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.04□□□□□ -2.4
CFAP54Q96N23 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms