Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 RNU2-42P-201ENST00000410697 113 ntBASIC1.31□□□□□ -2.2
CCDC42Q96M95 RNA5SP501-201ENST00000410990 112 ntBASIC1.31□□□□□ -2.2
CCDC42Q96M95 AC245102.2-201ENST00000448956 180 ntBASIC1.31□□□□□ -2.2
CCDC42Q96M95 AC079776.3-201ENST00000450665 370 ntBASIC1.31□□□□□ -2.2
CCDC42Q96M95 MTND2P3-201ENST00000452458 470 ntBASIC1.31□□□□□ -2.2
CCDC42Q96M95 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC42Q96M95 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.31□□□□□ -2.2
CCDC42Q96M95 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.31□□□□□ -2.2
CCDC42Q96M95 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.31□□□□□ -2.2
CCDC42Q96M95 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC42Q96M95 RNU6-548P-201ENST00000517083 115 ntBASIC1.31□□□□□ -2.2
CCDC42Q96M95 RN7SKP258-201ENST00000517151 304 ntBASIC1.31□□□□□ -2.2
CCDC42Q96M95 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC42Q96M95 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.31□□□□□ -2.2
CCDC42Q96M95 MIR3945-201ENST00000581853 98 ntBASIC1.31□□□□□ -2.2
CCDC42Q96M95 MIR3660-201ENST00000584845 100 ntBASIC1.31□□□□□ -2.2
CCDC42Q96M95 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC42Q96M95 AC010900.2-201ENST00000604508 210 ntBASIC1.31□□□□□ -2.2
CCDC42Q96M95 AC116312.1-201ENST00000606841 314 ntBASIC1.31□□□□□ -2.2
CCDC42Q96M95 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
CCDC42Q96M95 ZNF680P1-201ENST00000436625 1469 ntBASIC1.31□□□□□ -2.2
CCDC42Q96M95 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.3□□□□□ -2.2
CCDC42Q96M95 AC138393.1-203ENST00000327086 343 ntBASIC1.3□□□□□ -2.2
CCDC42Q96M95 RNU5B-1-201ENST00000363286 116 ntBASIC1.3□□□□□ -2.2
CCDC42Q96M95 RNU6-1122P-201ENST00000384449 107 ntBASIC1.3□□□□□ -2.2
CCDC42Q96M95 RNU2-41P-201ENST00000410991 178 ntBASIC1.3□□□□□ -2.2
CCDC42Q96M95 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC42Q96M95 OR51A5P-201ENST00000415429 942 ntBASIC1.3□□□□□ -2.2
CCDC42Q96M95 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC42Q96M95 MTND5P25-201ENST00000430499 799 ntBASIC1.3□□□□□ -2.2
CCDC42Q96M95 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.3□□□□□ -2.2
CCDC42Q96M95 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC42Q96M95 MTCO2P20-201ENST00000437339 673 ntBASIC1.3□□□□□ -2.2
CCDC42Q96M95 MTCO3P43-201ENST00000440974 771 ntBASIC1.3□□□□□ -2.2
CCDC42Q96M95 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC42Q96M95 TPRKBP1-201ENST00000456243 481 ntBASIC1.3□□□□□ -2.2
CCDC42Q96M95 AC010631.1-201ENST00000474150 156 ntBASIC1.3□□□□□ -2.2
CCDC42Q96M95 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC42Q96M95 AC093809.1-201ENST00000509155 340 ntBASIC1.3□□□□□ -2.2
CCDC42Q96M95 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.3□□□□□ -2.2
CCDC42Q96M95 RNU6-586P-201ENST00000517265 104 ntBASIC1.3□□□□□ -2.2
CCDC42Q96M95 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC42Q96M95 AP004247.1-201ENST00000531556 1289 ntBASIC1.3□□□□□ -2.2
CCDC42Q96M95 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.3□□□□□ -2.2
CCDC42Q96M95 AC135279.1-201ENST00000543493 504 ntBASIC1.3□□□□□ -2.2
CCDC42Q96M95 SNRPGP1-201ENST00000553864 222 ntBASIC1.3□□□□□ -2.2
CCDC42Q96M95 DNAJC19P9-201ENST00000555084 351 ntBASIC1.3□□□□□ -2.2
CCDC42Q96M95 AC021171.1-201ENST00000603137 706 ntBASIC1.3□□□□□ -2.2
CCDC42Q96M95 AP003476.1-201ENST00000623984 516 ntBASIC1.3□□□□□ -2.2
CCDC42Q96M95 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.3□□□□□ -2.2
CCDC42Q96M95 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC42Q96M95 RNU6-512P-201ENST00000364438 103 ntBASIC1.29□□□□□ -2.2
CCDC42Q96M95 RNU6-939P-201ENST00000384634 107 ntBASIC1.29□□□□□ -2.2
CCDC42Q96M95 AL133475.1-201ENST00000404414 305 ntBASIC1.29□□□□□ -2.2
CCDC42Q96M95 MIR1262-201ENST00000408276 93 ntBASIC1.29□□□□□ -2.2
CCDC42Q96M95 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC42Q96M95 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.29□□□□□ -2.2
CCDC42Q96M95 AC092634.2-201ENST00000428146 1010 ntBASIC1.29□□□□□ -2.2
CCDC42Q96M95 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.29□□□□□ -2.2
CCDC42Q96M95 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC42Q96M95 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.29□□□□□ -2.2
CCDC42Q96M95 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC42Q96M95 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.29□□□□□ -2.2
CCDC42Q96M95 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.29□□□□□ -2.2
CCDC42Q96M95 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.29□□□□□ -2.2
CCDC42Q96M95 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC42Q96M95 SUB1P3-201ENST00000564581 315 ntBASIC1.29□□□□□ -2.2
CCDC42Q96M95 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC42Q96M95 DPPA3P3-201ENST00000603842 430 ntBASIC1.29□□□□□ -2.2
CCDC42Q96M95 AL050343.2-201ENST00000607338 280 ntBASIC1.29□□□□□ -2.2
CCDC42Q96M95 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.29□□□□□ -2.2
CCDC42Q96M95 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.29□□□□□ -2.2
CCDC42Q96M95 AC091965.5-201ENST00000624785 342 ntBASIC1.29□□□□□ -2.2
CCDC42Q96M95 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CCDC42Q96M95 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CCDC42Q96M95 MIR26B-201ENST00000362251 77 ntBASIC1.28□□□□□ -2.2
CCDC42Q96M95 RNU6-188P-201ENST00000364207 107 ntBASIC1.28□□□□□ -2.2
CCDC42Q96M95 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CCDC42Q96M95 RNU6-354P-201ENST00000383862 107 ntBASIC1.28□□□□□ -2.2
CCDC42Q96M95 RNU6-610P-201ENST00000384264 107 ntBASIC1.28□□□□□ -2.2
CCDC42Q96M95 MIR597-201ENST00000384968 97 ntBASIC1.28□□□□□ -2.2
CCDC42Q96M95 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CCDC42Q96M95 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC42Q96M95 BRK1P2-201ENST00000442875 223 ntBASIC1.28□□□□□ -2.2
CCDC42Q96M95 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.28□□□□□ -2.2
CCDC42Q96M95 AC112492.4-201ENST00000456549 352 ntBASIC1.28□□□□□ -2.2
CCDC42Q96M95 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC42Q96M95 MTCYBP16-201ENST00000509187 1129 ntBASIC1.28□□□□□ -2.2
CCDC42Q96M95 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.28□□□□□ -2.2
CCDC42Q96M95 AC023538.1-201ENST00000534576 736 ntBASIC1.28□□□□□ -2.2
CCDC42Q96M95 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC42Q96M95 AC093012.1-202ENST00000549403 582 ntBASIC1.28□□□□□ -2.2
CCDC42Q96M95 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.28□□□□□ -2.2
CCDC42Q96M95 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.28□□□□□ -2.2
CCDC42Q96M95 RPL30P11-203ENST00000598995 310 ntBASIC1.28□□□□□ -2.2
CCDC42Q96M95 AL670379.10-201ENST00000604330 253 ntBASIC1.28□□□□□ -2.2
CCDC42Q96M95 AL670379.9-201ENST00000605428 253 ntBASIC1.28□□□□□ -2.2
CCDC42Q96M95 AC107952.2-201ENST00000606048 486 ntBASIC1.28□□□□□ -2.2
CCDC42Q96M95 U6.99-201ENST00000637524 83 ntBASIC1.28□□□□□ -2.2
CCDC42Q96M95 AL079343.1-201ENST00000572358 1771 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms