Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 AC072046.2-201ENST00000618366 268 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 AC093648.1-201ENST00000623546 606 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 AC004777.1-201ENST00000624317 287 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2□□□□□ -2.09
RPUSD4Q96CM3 AL596028.1-201ENST00000326971 197 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2□□□□□ -2.09
RPUSD4Q96CM3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2□□□□□ -2.09
RPUSD4Q96CM3 MIR412-201ENST00000362142 91 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2□□□□□ -2.09
RPUSD4Q96CM3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2□□□□□ -2.09
RPUSD4Q96CM3 MIR1302-8-201ENST00000408342 128 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 RNA5SP21-201ENST00000410917 96 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 RNU6-195P-201ENST00000411352 109 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2□□□□□ -2.09
RPUSD4Q96CM3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2□□□□□ -2.09
RPUSD4Q96CM3 RPL31P35-201ENST00000431058 377 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2□□□□□ -2.09
RPUSD4Q96CM3 AL161651.1-201ENST00000440882 223 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 AC011816.1-201ENST00000441346 546 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 AC009296.1-201ENST00000443146 155 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 AL031659.1-201ENST00000447075 539 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 AC022364.2-201ENST00000457963 554 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 AC022493.1-201ENST00000492984 337 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2□□□□□ -2.09
RPUSD4Q96CM3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2□□□□□ -2.09
RPUSD4Q96CM3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2□□□□□ -2.09
RPUSD4Q96CM3 HIGD1AP13-201ENST00000509878 289 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 AC117532.1-201ENST00000514638 323 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 SCARNA17.1-201ENST00000516211 143 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 SCARNA17.2-201ENST00000516334 143 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 RNU6-430P-201ENST00000517078 107 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2□□□□□ -2.09
RPUSD4Q96CM3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2□□□□□ -2.09
RPUSD4Q96CM3 LINC00933-203ENST00000559812 219 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 MIR3913-1-201ENST00000577744 102 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 MIR4658-201ENST00000584344 65 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 PIGPP4-201ENST00000584447 307 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 AC098848.2-201ENST00000588023 330 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 OR1M4P-201ENST00000589199 287 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2□□□□□ -2.09
RPUSD4Q96CM3 AC010620.1-201ENST00000601088 1102 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 AL138889.2-201ENST00000603883 242 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2□□□□□ -2.09
RPUSD4Q96CM3 SCARNA17.4-201ENST00000614296 143 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 AC245884.12-201ENST00000615364 59 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
RPUSD4Q96CM3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2□□□□□ -2.09
RPUSD4Q96CM3 uc_338.11-201ENST00000619132 160 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 AC025034.2-201ENST00000623264 286 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 AL157786.1-207ENST00000627771 695 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
RPUSD4Q96CM3 AC005336.3-201ENST00000623833 2679 ntBASIC2□□□□□ -2.09
RPUSD4Q96CM3 ADAM3A-203ENST00000461344 2157 ntBASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 Y_RNA.201-201ENST00000364052 96 ntBASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 RNU1-51P-201ENST00000365345 176 ntBASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 RNU6-748P-201ENST00000384648 107 ntBASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 EEF1A1P40-201ENST00000412883 573 ntBASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AL592148.1-201ENST00000413568 445 ntBASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 CDK8P2-201ENST00000415020 547 ntBASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 IPO7P1-201ENST00000442031 636 ntBASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AL513328.1-201ENST00000446460 224 ntBASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AC132479.1-201ENST00000449160 144 ntBASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AL139109.1-201ENST00000455491 297 ntBASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 MTCO2P18-201ENST00000457151 658 ntBASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 GMFBP1-201ENST00000467831 427 ntBASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AC010424.1-201ENST00000506336 297 ntBASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 RNU6-123P-201ENST00000516163 102 ntBASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 MTCYBP20-201ENST00000524239 1129 ntBASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 OR5AQ1P-201ENST00000527596 927 ntBASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AP000889.2-201ENST00000532684 490 ntBASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AC009127.3-201ENST00000570531 403 ntBASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AP005136.1-201ENST00000579765 429 ntBASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AC040904.1-201ENST00000590850 223 ntBASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AC005261.5-201ENST00000596280 355 ntBASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 NRBF2P5-201ENST00000603087 788 ntBASIC1.99□□□□□ -2.09
RPUSD4Q96CM3 AC087045.1-201ENST00000605856 382 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms