Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 RPS29P31-201ENST00000446147 164 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 AL358232.1-201ENST00000448030 501 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 AL583843.1-201ENST00000456070 346 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 Y_RNA.653-201ENST00000459091 95 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 HMGB3P15-201ENST00000507326 574 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 AC116337.1-201ENST00000509680 687 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 AC104619.4-201ENST00000510773 249 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 SNORA70.18-201ENST00000516696 98 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 RNU6-572P-201ENST00000516724 80 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 SNORA31.19-201ENST00000517079 126 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 AC009902.1-201ENST00000519351 183 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 APOOP3-201ENST00000536787 586 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 AC093249.1-201ENST00000567049 203 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 CYP2C61P-201ENST00000604072 290 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 AC080078.3-201ENST00000605407 463 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 AC027309.3-201ENST00000623419 351 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 U6.99-201ENST00000637524 83 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 AF117829.1-206ENST00000621883 3802 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 FTLP6-201ENST00000355274 422 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 SNORD62.1-201ENST00000362541 86 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 Y_RNA.146-201ENST00000363549 102 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 Y_RNA.187-201ENST00000363918 113 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 SNORA75B-201ENST00000384053 137 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 RNU6-217P-201ENST00000384164 104 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 SNORD116-29-201ENST00000384516 83 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 RNU6-95P-201ENST00000384697 107 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 SNORA40C-201ENST00000391285 128 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 AL590004.1-201ENST00000405321 300 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 AL592148.1-201ENST00000413568 445 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 AL354751.2-201ENST00000415471 210 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 AC245054.2-201ENST00000415639 319 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 AL096701.2-201ENST00000416920 238 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 DBIP2-201ENST00000419076 262 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 AL590632.1-201ENST00000424289 371 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 AL078601.1-201ENST00000444542 271 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 RBMY2UP-201ENST00000453474 324 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 AC027575.1-201ENST00000481064 460 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 RNU6-1016P-201ENST00000516689 94 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 AP005597.4-201ENST00000526762 229 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 AL355598.1-201ENST00000604169 202 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 AP000787.2-201ENST00000604432 568 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 FTX_3.1-201ENST00000610451 147 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 AC022149.2-201ENST00000621061 203 ntBASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CTHRC1Q96CG8 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 SNORD3E-201ENST00000362899 217 ntBASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 RNU6-1188P-201ENST00000363795 107 ntBASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 MIR10A-201ENST00000385043 110 ntBASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 AL445529.1-201ENST00000398713 389 ntBASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 RN7SKP111-201ENST00000410349 271 ntBASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 AF228730.4-201ENST00000421457 183 ntBASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 PGBD4P6-201ENST00000421501 610 ntBASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 AL353729.1-201ENST00000425044 720 ntBASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 AC098614.2-201ENST00000426040 255 ntBASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 HIGD1AP11-201ENST00000438361 280 ntBASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 HMGB3P8-201ENST00000449709 577 ntBASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 RPL30P15-201ENST00000457129 321 ntBASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 AC092798.1-201ENST00000458542 409 ntBASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 U3.44-201ENST00000458938 192 ntBASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 ANP32BP3-201ENST00000559213 706 ntBASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 MIR4782-201ENST00000577987 79 ntBASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 159.1 ms