Protein–RNA interactions for Protein: Q96BT1

C3orf49, Putative uncharacterized protein C3orf49, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49Q96BT1 ADAM3A-203ENST00000461344 2157 ntBASIC3.18□□□□□ -1.9
C3orf49Q96BT1 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
C3orf49Q96BT1 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
C3orf49Q96BT1 Y_RNA.373-201ENST00000365600 103 ntBASIC3.18□□□□□ -1.9
C3orf49Q96BT1 MIR218-2-201ENST00000385006 110 ntBASIC3.18□□□□□ -1.9
C3orf49Q96BT1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
C3orf49Q96BT1 AL162578.1-201ENST00000406202 378 ntBASIC3.18□□□□□ -1.9
C3orf49Q96BT1 RAP1BP3-201ENST00000407180 549 ntBASIC3.18□□□□□ -1.9
C3orf49Q96BT1 U3.37-201ENST00000408528 213 ntBASIC3.18□□□□□ -1.9
C3orf49Q96BT1 RNU6-1148P-201ENST00000410992 104 ntBASIC3.18□□□□□ -1.9
C3orf49Q96BT1 USP9YP20-201ENST00000419224 558 ntBASIC3.18□□□□□ -1.9
C3orf49Q96BT1 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.18□□□□□ -1.9
C3orf49Q96BT1 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.18□□□□□ -1.9
C3orf49Q96BT1 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.18□□□□□ -1.9
C3orf49Q96BT1 RNU7-66P-201ENST00000459469 62 ntBASIC3.18□□□□□ -1.9
C3orf49Q96BT1 MTCO2P30-201ENST00000503662 364 ntBASIC3.18□□□□□ -1.9
C3orf49Q96BT1 AC090136.1-201ENST00000520009 240 ntBASIC3.18□□□□□ -1.9
C3orf49Q96BT1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.18□□□□□ -1.9
C3orf49Q96BT1 AC118273.2-201ENST00000532092 465 ntBASIC3.18□□□□□ -1.9
C3orf49Q96BT1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.18□□□□□ -1.9
C3orf49Q96BT1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.18□□□□□ -1.9
C3orf49Q96BT1 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.18□□□□□ -1.9
C3orf49Q96BT1 PSMA3P-201ENST00000555485 635 ntBASIC3.18□□□□□ -1.9
C3orf49Q96BT1 TGIF1P1-201ENST00000558095 802 ntBASIC3.18□□□□□ -1.9
C3orf49Q96BT1 AC025281.1-201ENST00000567026 265 ntBASIC3.18□□□□□ -1.9
C3orf49Q96BT1 AC010653.1-201ENST00000571108 881 ntBASIC3.18□□□□□ -1.9
C3orf49Q96BT1 AC007179.3-201ENST00000604976 235 ntBASIC3.18□□□□□ -1.9
C3orf49Q96BT1 CTHRC1P1-201ENST00000605383 469 ntBASIC3.18□□□□□ -1.9
C3orf49Q96BT1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.18□□□□□ -1.9
C3orf49Q96BT1 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
C3orf49Q96BT1 AC091953.5-201ENST00000622919 233 ntBASIC3.18□□□□□ -1.9
C3orf49Q96BT1 Z69720.2-201ENST00000624755 279 ntBASIC3.18□□□□□ -1.9
C3orf49Q96BT1 MIR3199-2-201ENST00000636243 86 ntBASIC3.18□□□□□ -1.9
C3orf49Q96BT1 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
C3orf49Q96BT1 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
C3orf49Q96BT1 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
C3orf49Q96BT1 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
C3orf49Q96BT1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.18□□□□□ -1.9
C3orf49Q96BT1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.17□□□□□ -1.9
C3orf49Q96BT1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.17□□□□□ -1.9
C3orf49Q96BT1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
C3orf49Q96BT1 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.17□□□□□ -1.9
C3orf49Q96BT1 Y_RNA.88-201ENST00000363029 99 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 RNU1-105P-201ENST00000363470 161 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 Y_RNA.530-201ENST00000384587 101 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 RNU6-876P-201ENST00000391295 104 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 RNU2-49P-201ENST00000410666 184 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.17□□□□□ -1.9
C3orf49Q96BT1 AC009161.1-201ENST00000417306 376 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.17□□□□□ -1.9
C3orf49Q96BT1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.17□□□□□ -1.9
C3orf49Q96BT1 CYCSP4-201ENST00000429682 331 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.17□□□□□ -1.9
C3orf49Q96BT1 AC233279.1-201ENST00000455300 423 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 snoU109.2-201ENST00000459316 135 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 RPS27P26-201ENST00000494583 239 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 AC010265.1-201ENST00000513509 211 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 SNORA19.2-201ENST00000516013 114 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 Y_RNA.687-201ENST00000516558 91 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 SNORA70.19-201ENST00000516717 90 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 RNU6-1314P-201ENST00000517139 104 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 SNORA70.24-201ENST00000517233 118 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 AC069113.1-201ENST00000517763 267 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 BTF3P12-201ENST00000519620 469 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.17□□□□□ -1.9
C3orf49Q96BT1 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.17□□□□□ -1.9
C3orf49Q96BT1 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.17□□□□□ -1.9
C3orf49Q96BT1 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.17□□□□□ -1.9
C3orf49Q96BT1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.17□□□□□ -1.9
C3orf49Q96BT1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
C3orf49Q96BT1 MIR3922-201ENST00000585192 84 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.17□□□□□ -1.9
C3orf49Q96BT1 APOOP1-201ENST00000604695 592 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 AL121757.2-201ENST00000611223 313 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 AC096577.2-201ENST00000611455 153 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 AC010378.1-201ENST00000619270 362 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 AL136221.1-201ENST00000621449 509 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 SCARNA4-202ENST00000625402 129 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 AC110079.1-202ENST00000635213 138 ntBASIC3.17□□□□□ -1.9
C3orf49Q96BT1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
C3orf49Q96BT1 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
C3orf49Q96BT1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.17□□□□□ -1.9
C3orf49Q96BT1 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.17□□□□□ -1.9
C3orf49Q96BT1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
C3orf49Q96BT1 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.16□□□□□ -1.9
C3orf49Q96BT1 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.16□□□□□ -1.9
C3orf49Q96BT1 RNU6-750P-201ENST00000390946 107 ntBASIC3.16□□□□□ -1.9
C3orf49Q96BT1 AC138393.2-201ENST00000414742 246 ntBASIC3.16□□□□□ -1.9
C3orf49Q96BT1 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.16□□□□□ -1.9
C3orf49Q96BT1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.16□□□□□ -1.9
C3orf49Q96BT1 AL513185.2-201ENST00000425543 193 ntBASIC3.16□□□□□ -1.9
C3orf49Q96BT1 NDUFA5P4-201ENST00000436704 385 ntBASIC3.16□□□□□ -1.9
C3orf49Q96BT1 AL671855.1-201ENST00000446875 1203 ntBASIC3.16□□□□□ -1.9
C3orf49Q96BT1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.16□□□□□ -1.9
C3orf49Q96BT1 RPS4XP2-201ENST00000458402 793 ntBASIC3.16□□□□□ -1.9
C3orf49Q96BT1 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.16□□□□□ -1.9
C3orf49Q96BT1 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.16□□□□□ -1.9
C3orf49Q96BT1 AC074250.1-201ENST00000511117 192 ntBASIC3.16□□□□□ -1.9
C3orf49Q96BT1 AC113155.1-201ENST00000511141 769 ntBASIC3.16□□□□□ -1.9
C3orf49Q96BT1 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms