Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 RNU7-180P-201ENST00000459240 63 ntBASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 TRBV1-201ENST00000476502 284 ntBASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 MTAPP1-201ENST00000489154 819 ntBASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 AL117351.2-201ENST00000513571 157 ntBASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 RNU4-29P-201ENST00000515943 174 ntBASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 RNU6-572P-201ENST00000516724 80 ntBASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 AC068657.1-201ENST00000520807 306 ntBASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 AL391261.3-201ENST00000557194 520 ntBASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 AC010525.2-201ENST00000590920 195 ntBASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 AL355598.1-201ENST00000604169 202 ntBASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 uc_338.34-201ENST00000617467 174 ntBASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.89
SH3KBP1Q96B97 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 RNU6-371P-201ENST00000364283 108 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 RNU6-534P-201ENST00000364877 106 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 RNU6-1127P-201ENST00000384580 107 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 Y_RNA.573-201ENST00000384763 105 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 AL356057.2-201ENST00000403318 432 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 MIR1277-201ENST00000408536 78 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 RNA5SP31-201ENST00000411144 127 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 MTND1P23-201ENST00000416931 372 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 AL353729.1-201ENST00000425044 720 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 SKA2P1-201ENST00000425592 390 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 RPL23AP22-201ENST00000437556 453 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 AL121601.2-201ENST00000438019 707 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 RPL37P4-201ENST00000448908 268 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 MTND3P16-201ENST00000452205 344 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 AC109925.1-201ENST00000478069 331 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 RPS27P26-201ENST00000494583 239 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 MTND3P25-201ENST00000509243 135 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 TBCAP3-201ENST00000512475 312 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 AC112206.3-201ENST00000514578 389 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 SNORA31.19-201ENST00000517079 126 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 MTND4P7-201ENST00000523876 130 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 HSPE1P20-201ENST00000538133 289 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 MIR5004-201ENST00000579078 107 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 AC012119.1-201ENST00000603184 222 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 MIR8057-201ENST00000620957 69 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 MIR3662-201ENST00000637030 95 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 AC024614.3-201ENST00000637860 256 ntBASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SH3KBP1Q96B97 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 AL139276.1-201ENST00000311910 1001 ntBASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 RNU4-20P-201ENST00000365601 151 ntBASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 RNU6-395P-201ENST00000365662 106 ntBASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 RNU1-73P-201ENST00000383971 164 ntBASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 MIR627-201ENST00000384979 97 ntBASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 CST9LP2-201ENST00000437612 320 ntBASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 AL360271.2-201ENST00000447710 161 ntBASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 RPS15AP27-201ENST00000449183 343 ntBASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 AL583843.1-201ENST00000456070 346 ntBASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 RPL27AP5-201ENST00000469428 449 ntBASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 RPL21P99-201ENST00000480369 423 ntBASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 AC069439.1-201ENST00000494739 167 ntBASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 RNA5SP385-201ENST00000515947 110 ntBASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 AL137161.1-201ENST00000532231 390 ntBASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 MIR5692A1-201ENST00000580523 69 ntBASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 MIR4506-201ENST00000584693 77 ntBASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 AC012493.2-201ENST00000595083 291 ntBASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 AC073539.2-201ENST00000597113 165 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms