Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 RPL30P5-201ENST00000494923 336 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.66□□□□□ -2.3
TTC28Q96AY4 SNORA31.18-201ENST00000517043 134 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
TTC28Q96AY4 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC0.66□□□□□ -2.3
TTC28Q96AY4 AC007151.1-201ENST00000572774 483 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 AC016542.1-201ENST00000608259 493 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.66□□□□□ -2.3
TTC28Q96AY4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
TTC28Q96AY4 Y_RNA.421-201ENST00000384052 101 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 RNU6-921P-201ENST00000384361 107 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 MIR150-201ENST00000385048 84 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 AC096649.2-201ENST00000416186 393 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 MTCO1P57-201ENST00000432182 261 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.66□□□□□ -2.3
TTC28Q96AY4 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
TTC28Q96AY4 AC104073.1-201ENST00000451988 151 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 AC096745.1-201ENST00000509945 370 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 AC093770.1-201ENST00000511559 571 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 SNORA31.25-201ENST00000517242 134 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.66□□□□□ -2.3
TTC28Q96AY4 DEFB108D-201ENST00000527787 222 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 AC090888.1-201ENST00000561335 1141 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 LINC00557-201ENST00000563184 1279 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 MIR4529-201ENST00000578110 78 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 SNORD39.3-201ENST00000584451 71 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 RPL21P136-201ENST00000605378 396 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 AL050343.2-201ENST00000607338 280 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
TTC28Q96AY4 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
TTC28Q96AY4 ZNF702P-202ENST00000434269 1966 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 AC091812.1-201ENST00000432235 1948 ntBASIC0.66□□□□□ -2.3
TTC28Q96AY4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.65□□□□□ -2.3
TTC28Q96AY4 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
TTC28Q96AY4 Y_RNA.100-201ENST00000363141 102 ntBASIC0.65□□□□□ -2.3
TTC28Q96AY4 Y_RNA.428-201ENST00000384078 102 ntBASIC0.65□□□□□ -2.3
TTC28Q96AY4 MIR7-1-201ENST00000384871 110 ntBASIC0.65□□□□□ -2.3
TTC28Q96AY4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
TTC28Q96AY4 GTF2IP20-201ENST00000431663 360 ntBASIC0.65□□□□□ -2.3
TTC28Q96AY4 Z82210.1-201ENST00000440037 231 ntBASIC0.65□□□□□ -2.3
TTC28Q96AY4 RAC1P7-201ENST00000445367 377 ntBASIC0.65□□□□□ -2.3
TTC28Q96AY4 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.65□□□□□ -2.3
TTC28Q96AY4 RNA5SP57-201ENST00000459463 123 ntBASIC0.65□□□□□ -2.3
TTC28Q96AY4 AC147055.4-201ENST00000504399 745 ntBASIC0.65□□□□□ -2.3
TTC28Q96AY4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
TTC28Q96AY4 RNU6-229P-201ENST00000516614 102 ntBASIC0.65□□□□□ -2.3
TTC28Q96AY4 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.65□□□□□ -2.3
TTC28Q96AY4 AP003355.1-201ENST00000518956 587 ntBASIC0.65□□□□□ -2.3
TTC28Q96AY4 HIGD1AP6-201ENST00000521833 279 ntBASIC0.65□□□□□ -2.3
TTC28Q96AY4 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.65□□□□□ -2.3
TTC28Q96AY4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.65□□□□□ -2.3
TTC28Q96AY4 AC084033.1-201ENST00000550830 633 ntBASIC0.65□□□□□ -2.3
TTC28Q96AY4 AGGF1P5-201ENST00000567900 919 ntBASIC0.65□□□□□ -2.3
TTC28Q96AY4 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.65□□□□□ -2.3
TTC28Q96AY4 MIR4514-201ENST00000581410 57 ntBASIC0.65□□□□□ -2.3
TTC28Q96AY4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.65□□□□□ -2.3
TTC28Q96AY4 ELOCP5-201ENST00000604924 333 ntBASIC0.65□□□□□ -2.3
TTC28Q96AY4 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.65□□□□□ -2.3
TTC28Q96AY4 AC007349.4-201ENST00000608114 532 ntBASIC0.65□□□□□ -2.3
TTC28Q96AY4 AL161423.1-201ENST00000613700 262 ntBASIC0.65□□□□□ -2.3
TTC28Q96AY4 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.65□□□□□ -2.3
TTC28Q96AY4 AC092608.3-201ENST00000625017 386 ntBASIC0.65□□□□□ -2.3
TTC28Q96AY4 AL049641.1-201ENST00000441055 1948 ntBASIC0.65□□□□□ -2.31
TTC28Q96AY4 RNU6-1155P-201ENST00000363554 107 ntBASIC0.65□□□□□ -2.31
TTC28Q96AY4 MIR153-2-201ENST00000385225 87 ntBASIC0.65□□□□□ -2.31
TTC28Q96AY4 MIR325-201ENST00000385260 98 ntBASIC0.65□□□□□ -2.31
TTC28Q96AY4 AL512604.1-201ENST00000404812 257 ntBASIC0.65□□□□□ -2.31
TTC28Q96AY4 PTGES3P2-201ENST00000407942 482 ntBASIC0.65□□□□□ -2.31
TTC28Q96AY4 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.65□□□□□ -2.31
TTC28Q96AY4 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.65□□□□□ -2.31
TTC28Q96AY4 MTCO3P2-201ENST00000457365 171 ntBASIC0.65□□□□□ -2.31
TTC28Q96AY4 RNU4-77P-201ENST00000516692 156 ntBASIC0.65□□□□□ -2.31
TTC28Q96AY4 SCARNA3-201ENST00000517097 143 ntBASIC0.65□□□□□ -2.31
TTC28Q96AY4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.65□□□□□ -2.31
TTC28Q96AY4 DUXAP1-201ENST00000556632 463 ntBASIC0.65□□□□□ -2.31
TTC28Q96AY4 AC009974.1-201ENST00000608881 455 ntBASIC0.65□□□□□ -2.31
TTC28Q96AY4 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
TTC28Q96AY4 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.65□□□□□ -2.31
TTC28Q96AY4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0.65□□□□□ -2.31
TTC28Q96AY4 RNU4-32P-201ENST00000363404 141 ntBASIC0.64□□□□□ -2.31
TTC28Q96AY4 RPL23AP32-201ENST00000395315 459 ntBASIC0.64□□□□□ -2.31
TTC28Q96AY4 RNU2-15P-201ENST00000410692 191 ntBASIC0.64□□□□□ -2.31
TTC28Q96AY4 RNU6-564P-201ENST00000410983 104 ntBASIC0.64□□□□□ -2.31
TTC28Q96AY4 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.64□□□□□ -2.31
TTC28Q96AY4 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.64□□□□□ -2.31
TTC28Q96AY4 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.64□□□□□ -2.31
TTC28Q96AY4 AL591043.1-201ENST00000432461 424 ntBASIC0.64□□□□□ -2.31
TTC28Q96AY4 AC092573.2-201ENST00000434546 243 ntBASIC0.64□□□□□ -2.31
TTC28Q96AY4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.64□□□□□ -2.31
TTC28Q96AY4 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.64□□□□□ -2.31
TTC28Q96AY4 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.64□□□□□ -2.31
TTC28Q96AY4 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.64□□□□□ -2.31
TTC28Q96AY4 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
TTC28Q96AY4 AC107953.1-201ENST00000522216 297 ntBASIC0.64□□□□□ -2.31
TTC28Q96AY4 OR5AL2P-201ENST00000532185 920 ntBASIC0.64□□□□□ -2.31
TTC28Q96AY4 CYP4A27P-201ENST00000567218 190 ntBASIC0.64□□□□□ -2.31
TTC28Q96AY4 AC078899.2-201ENST00000595282 212 ntBASIC0.64□□□□□ -2.31
TTC28Q96AY4 SNRPGP17-201ENST00000603780 214 ntBASIC0.64□□□□□ -2.31
TTC28Q96AY4 AC007038.2-201ENST00000608095 740 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms